Vibrio alginolyticus: N646_2075
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Entry
N646_2075 CDS
T02840
Name
(GenBank) GGDEF family protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vag
Vibrio alginolyticus
Pathway
vag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
N646_2075
Enzymes [BR:
vag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
N646_2075
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Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
NCF1_PBR_AIR
Motif
Other DBs
NCBI-ProteinID:
AGV17894
UniProt:
A0A2I3CCG0
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All DBs
Position
1:complement(2246085..2248571)
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AA seq
828 aa
AA seq
DB search
MRAFSKLVHDVSQLNDFLVTFPTSSDKQYLVQILSTQSREITTTLADAVLSSLPNAHVMG
HSTRNVILEGEIFTSGCLVSVIEFEQTTLTSAVQTYSYSPDIDGGELKRSLLMQHNSQVI
LSFAVQIERRDYPLFQTFASEEVVISGGLAQSIDDGCWVLYQNRVYDNAVVAVALHSDTL
KLWTDAYSEWNPIGMPHKVTHAKGTRLYCLGEKKALDVYKRYLADGHDVTLSQLLSFPLY
RESLGRKEVCTVTELHADGSMSFDRPWCLGDEVQFCYNHPSLTLEQVRHGVVELAMHQPE
VVMIFNCASRLDFIDSSDEVQAFKDIATTFGSYCMGELHGGIGQPEILHHSLTYLAMREG
DEVQTLNLPKSPVSSSISPLFSLIRNAIGDLNHMNAHMGYQLDRQTRKLQESYRRDSRTG
LQNRVALQERLSNIDLDEHLLTLKLLNFSHINEKYGYRVGDQLLKDLSMHFTNRLRKRFG
MPTALQLYSIGVGEWAFIFKADQSSETIKQHFTRFADAVEQTNFEPIGLREIDYLSISLC
GGLVSRRDFPSASVDELLLKGIEARRSGVRSNTHICNAKDIEVSEDVRKEQLGWLSCVSR
AILKQNIITYSQPIVHAGSHKLASQECLVRILEADGTVIAPGRFLPIISDTHLYTRLSRH
MIHSTLHYMRDKQGDFSINLSPQDLLSDKTLMLLEHEISQLNDPRRIGLEVLESEQIKDY
GRMIEVCSHFRSLGARIIVDDFGSGYSNIDEILKLEPEVIKLDGSLIRDIDKDLKQRKIA
SQLVRLCQVFNAETVAEFVHNQEVCTIAQDMGVDYLQGYYLGEPTRLF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctttttcaaaactggttcacgatgtcagtcaactgaatgactttttagtcact
tttccgacttcctcagataaacaatatttagtacaaatattgtcgacgcaatcgcgcgaa
attacgaccacacttgcagacgccgttttgtcgtcgctgccgaatgctcatgttatgggg
catagtacgcgtaatgtgattctggaaggggagatatttacctctggttgcctagtgagt
gtgattgaatttgagcaaaccacgctgacttctgcggtacaaacatactcttactcccct
gacattgatggcggggagctcaagcgctctcttctaatgcagcataattcacaggtgatc
ctcagctttgctgtgcaaattgaacgacgtgactatcccttgtttcaaaccttcgccagt
gaagaagtagtgatttctggagggttggcgcagagtattgacgatggctgctgggtgcta
tatcaaaaccgagtttacgataacgctgtggttgccgtagctttgcacagtgatactttg
aagctatggactgatgcgtattcggaatggaacccgattggcatgccacacaaagtcact
catgcaaaaggaacgcgcttgtattgtttaggtgagaagaaagcactggacgtatacaag
cgttacttggcggatggccatgacgtgacgctgagtcaactgctcagctttcctttatat
cgagaaagcttagggcgaaaggaagtttgtacggtaacggagctacacgctgatggcagt
atgagcttcgacaggccctggtgtcttggtgacgaagtgcaattttgctataaccatccc
tcgttaacgctcgagcaagtgcggcatggtgtggttgagttagccatgcaccaacctgaa
gtcgttatgatttttaactgcgcgtcacggttagactttattgacagcagcgacgaagtc
caagccttcaaagatattgcgacgacgtttggtagttactgtatgggggaactgcatggt
ggtattggtcagcccgaaattcttcatcacagcctgacgtatttagcgatgcgagaggga
gacgaagtgcaaacattgaacttgcctaagtcgcccgttagctcctctatttcaccgttg
tttagcttgattcgaaatgcgatcggcgatctcaaccatatgaacgcgcatatgggatat
caactcgatcgccaaacgcgcaagttacaagaaagctatcgacgcgacagtcgcacgggg
ttacaaaaccgggtcgcattgcaagagcggttgagtaacatcgatttggatgagcatttg
ttgactctaaagctacttaactttagtcatattaacgaaaaatacggctaccgagtggga
gatcaattactcaaagatctctcaatgcactttacgaatcgactacgaaagcgttttggc
atgccaacggctttgcagctttatagtattggggttggtgagtgggcattcatatttaaa
gctgaccaaagcagcgaaaccatcaaacagcactttacgcgttttgctgacgcggtagaa
caaactaattttgagccaattggcctacgtgaaatagattatctttctatctcgctatgc
ggcggcttagtgagtcgtcgagactttccatccgcttcagtggatgagctcttactcaaa
ggcatcgaagcgaggcgctctggtgtacgcagtaatacccatatctgtaatgcgaaagat
attgaagtcagtgaggatgtgcgtaaagagcaacttggatggctaagttgcgtcagtaga
gccattctcaaacagaatatcatcacttatagccaacctattgtgcatgcgggtagccac
aaattggcaagccaagaatgtttggttcgtattctggaagccgatggaacggtgattgcg
ccagggcgttttctgccaattatctctgatacgcatctttacactcgactaagtcggcac
atgattcattctacgttgcattatatgcgagataagcaaggtgacttttctataaactta
tcgccgcaagatttgctcagtgataaaactttaatgcttttagagcatgaaattagccag
ctaaatgacccaaggcgaattggtttagaagtgctggaatctgagcagatcaaagactac
ggccgaatgatagaagtgtgcagtcattttagaagcttaggggcgcgtatcattgttgat
gactttgggtccggttattcgaatatcgatgaaatcctaaagttggagccagaagtcata
aagctcgatggcagcttgattcgtgatattgataaagacttaaaacagcgcaagatcgct
tcccagttggtgcgtttgtgccaggtgtttaacgcggagacggtggcggagttcgtccac
aatcaggaggtgtgtaccattgcacaagacatgggggtggattatttgcagggttactat
cttggcgagccgactcgactgttttaa
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