Verticillium alfalfae: VDBG_01164
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Entry
VDBG_01164 CDS
T02227
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Module
val_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_01164
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
VDBG_01164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
9531065
NCBI-ProteinID:
XP_003009481
UniProt:
C9S5H8
LinkDB
All DBs
AA seq
464 aa
AA seq
DB search
MKVSALFTALAAATSVIAVAVDLPAGVPRNVQEFREKHPVAKRTPHCRKTFTPRASENAE
DDISADLLNAIKSANNGGTVYLPKDQLFVIDEPLDLTFLNDIHIHLEGTIQFTNNVEKWQ
KNAFYHPFQRSLMFWKWGGKDVRIYGEGTIDGQGQRWWNEFSGAEILDPDNDYLRPVLFF
AEHIDNLHVEGILMKNSPVWHNFIVDSTNIFYEDVIISAKSNRAGVEPKNGDFFNSLNVD
HIRINRVWVDSDDDCFSPKTNSTDIHVDTMYCNNSHGQSIGSLGQYEGEYVIVKDVVIEN
VWMLNGNNGARIKVWAGENVAEGFVDNITFRNFYSANDDWPIFLDSCYFNVNAETCRKFP
SKMKVSNVLFENFEGYSSGVRGRAVARVSCSPAEGAGCENVKFVNFNVTSPCGGPSVIIC
DGVEGGLGVDCVPFDSPEAKAALADKCTNPEKAKIEAPWPVRDY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccgccctctttactgcccttgcggctgctacctcggtgatcgccgtagct
gtcgaccttcccgcaggcgttcctcgcaatgttcaagagttccgagagaagcatcctgtc
gcgaagcgaactccccactgccgcaagaccttcacgcctcgcgcctccgagaacgccgag
gacgatatctcagccgatcttctcaatgccattaagagcgccaataatggtggtactgtc
tacctgcccaaggatcagctcttcgtcatcgatgagccccttgatctgaccttcctcaac
gacattcacatccacctcgagggcaccatccagttcaccaacaatgttgagaagtggcag
aagaacgccttctaccaccctttccagcgctcgcttatgttttggaaatggggtggcaag
gatgtcaggatctatggcgagggtaccatcgatggacagggccagcgctggtggaatgag
ttctcgggcgccgagatccttgaccctgacaatgactacctccgccctgtgcttttcttt
gctgagcacattgacaacctgcacgttgaaggcattctcatgaagaactcgcccgtttgg
cacaactttatcgtcgattcaaccaatatcttctacgaggacgtaatcatctcagcgaaa
tcgaaccgcgccggtgtcgagcccaagaacggcgactttttcaactcccttaacgttgat
catattcgcatcaaccgcgtctgggtcgattcggacgacgactgcttctcgcccaagacc
aacagcaccgacattcacgtggacacgatgtactgcaacaactcacacggacagtcgatc
ggttcgctcggccagtatgagggcgagtatgtcatcgtcaaggacgttgtcattgagaat
gtctggatgctcaacggtaacaacggcgcccgcatcaaggtctgggctggtgagaacgtc
gccgagggattcgttgacaacatcacgttccgcaacttctattcggccaacgacgactgg
cctatcttcctcgactcgtgctacttcaacgtcaatgccgagacgtgccgcaagttccca
tccaagatgaaggtctccaacgtcctatttgaaaattttgaaggctactcgtccggcgtc
cgtggccgtgctgttgcgcgcgtcagttgctcgcctgctgagggcgcaggctgcgaaaat
gtcaagtttgtcaactttaacgtcacatcgccctgcggcggaccctcggttatcatttgc
gacggtgttgaaggcggcctcggagtggactgcgtgccgtttgactcgccggaggccaag
gctgctctggcggacaagtgcaccaaccctgagaaggcaaagattgaggctccttggcct
gtccgggactactga
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