KEGG   Verticillium alfalfae: VDBG_04162
Entry
VDBG_04162        CDS       T02227                                 
Name
(RefSeq) CTD kinase subunit alpha
  KO
K00916  CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:val01001]
    VDBG_04162
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_04162
Enzymes [BR:val01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     VDBG_04162
    2.7.11.23  [RNA-polymerase]-subunit kinase
     VDBG_04162
Protein kinases [BR:val01001]
 Serine/threonine kinases: CMGC group
  CDK family
   VDBG_04162
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    CTDK-I complex
     VDBG_04162
  RNA polymerase I system
     VDBG_04162
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Kinase-like
Other DBs
NCBI-GeneID: 9534852
NCBI-ProteinID: XP_003006209
UniProt: C9SG39
LinkDB
AA seq 792 aa
MSGRGSHRGGFNARHQAHNAFAGNHGYSDPYQYYHPPPHFPPNPYINSPNMSPYDMGGWG
GSPHHQYPPQYPQGPQGMYPPQNGPQGQYPPSNPYSPPPSAPTGPMQQYGRGSNFRGGSS
GFRGNQFSGARGGYRGNNFKSAQWNASQTIGGRGSSAQGDDAKSQKSSNSAVASVKSDKD
DFEEQPNSFRPSKDLQVEDTSPPVISDDKEMAPPTRPPPSGPAAQSPASSVSSKFSFAFK
ASAKPTPAVPKPEISQKFNALPPKKEPTQQTDDKDTNNRDREREHEHRAREDRERERDRE
RDQERDRDRERDRERDRRDREYRERDRRERDYRERDHRERDIPRGAPTEPASARGRQDAR
HHQQPPPPGPKAAPPPPAPKTRIVKQKMKRLKPRLSLPPDLVKSESVYFRKPGNESVVGS
GTYGKVFKGLHCYTKDLVALKKIRMEGEKDGFPVTAVREIKLLQSLRHPNVVELKEVMVE
KNDCFMVFEYLSHDLTGLLNHPSFKLDAAQKKHLARQVFEGLDYLHVRGVLHRDLKAANI
LVSSDGILKLADFGLARFYAKRHQLDYTNRVITIWYRSPELLLGETRYGPACDMWSTACI
LMEIFTRHAIFPGDGGEISQLDKIYNVMGTPNKAEWPGLIDMPWFELLRPGYRRASSFAA
KYRDKLTPAAYDLIWSIFKYDPAKRPSAAEALQHTYFMTEEPPARQAIELANLDGDWHEL
ESKALRKENERKEREARHAARSKDGRDHRQKEKDRKRENETHDQRGDAKRLHVEGKPPQP
VDHATAAAAHKA
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgtcgggacgtggcagccaccgtggaggcttcaatgctcgccaccaggcgcacaacgct
tttgctggcaatcatgggtatagtgacccctatcagtactatcaccctcccccccacttc
cctccgaacccctacatcaactcacctaacatgtctccctacgacatgggcggttggggt
ggctctccccaccaccagtatccccctcagtatccacagggacctcagggcatgtatccg
ccgcaaaacgggccccaaggacaatatccaccctcgaacccatattcacctcccccatct
gccccaacaggcccgatgcagcaatatggcagaggtagcaacttccgcggaggcagttca
ggcttccgaggcaatcaattcagtggtgcacgtggaggctaccgcgggaacaatttcaag
agcgcgcagtggaacgcttcacaaacgattggaggtcggggctcgtctgcgcaaggggac
gatgccaagtcacagaagtcatccaattccgccgtcgcaagcgtcaagtcggacaaagac
gatttcgaagagcaaccaaattcctttcgtccgtccaaagacctccaggtcgaagacacg
tcgccccccgtgatctcagatgataaggaaatggctcctcccacgcggcctcctccatct
ggtccagcagcacaatctccggcgtcgtcggtgtcgtcaaagttcagttttgcatttaag
gcatctgcaaaacccactcccgcggtaccgaaaccagagatatctcagaaattcaatgct
ttgcctccaaagaaagagccgactcagcaaactgacgataaagataccaacaaccgcgat
cgggaacgggaacacgagcacagagctcgagaggaccgggaacgggagcgagaccgggag
cgagaccaagagcgtgaccgcgatcgtgaacgtgatcgcgaaagagaccgtcgtgatcgc
gagtaccgggaacgcgaccgtcgcgagcgggactaccgcgaacgagaccatcgtgagcgc
gacattccacgcggcgcaccaacagaaccggcatctgctagaggaaggcaagacgcaagg
catcatcaacaaccaccacctccgggtccgaaggcagcaccaccgcctcccgcccccaag
actcggattgtgaagcaaaagatgaagcgtctcaagccgcggctgagcttaccaccagat
ctcgtcaagtccgaatcagtctactttcgaaagcctggcaacgagtcggttgttggttct
ggtacctatggcaaggtgttcaaaggtctacactgctacaccaaggatctggttgcactg
aagaagattcggatggagggcgaaaaggacgggttccctgtgacggctgtccgcgagatc
aaactcctccagtcgctccgacaccccaacgttgtcgagctcaaggaggtcatggtggag
aagaatgactgtttcatggtcttcgagtatctttctcacgacttgacgggcttgctcaat
catccttccttcaaactcgatgctgcccagaaaaagcatcttgccaggcaggttttcgaa
ggcctcgactatcttcatgttcgcggcgttttgcacagagatctcaaagctgccaacatc
ctggtcagcagcgacggaatcctcaagcttgccgactttggtctggcacgcttctacgcc
aaacggcatcagctcgactatacaaaccgtgtcatcacgatatggtatcgttctcctgag
cttctcttgggagagacgcgatacggcccagcttgcgacatgtggagcacggcttgtatc
ctgatggaaatcttcacgcgccacgccatatttcctggcgacggtggcgagatcagtcaa
ctcgacaagatttacaatgtcatggggaccccgaacaaagctgaatggcccggtcttatc
gacatgccctggttcgaactcttgcggccaggttaccgacgggccagttcttttgccgcc
aagtacagggacaagctcacacccgccgcttacgacttgatttggtccatcttcaaatat
gacccagcgaagcgcccgagtgcagccgaagctcttcagcacacatactttatgaccgag
gaaccgcctgcgcgtcaagccattgagctcgcaaacttggatggtgactggcatgagctt
gagtcgaaagcactccgcaaggagaatgagcggaaagagagagaggcccggcacgcagca
cgcagcaaagacggtcgagaccaccgacagaaggagaaagatcgcaagcgtgagaatgag
acgcatgaccagcgcggtgatgccaaacgactgcatgtggagggtaaaccgccgcagcct
gtggatcacgccactgccgctgctgcgcacaaggcctag

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