Verticillium alfalfae: VDBG_04162
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Entry
VDBG_04162 CDS
T02227
Name
(RefSeq) CTD kinase subunit alpha
KO
K00916
CTD kinase subunit alpha [EC:
2.7.11.22
2.7.11.23
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
val01001
]
VDBG_04162
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_04162
Enzymes [BR:
val01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
VDBG_04162
2.7.11.23 [RNA-polymerase]-subunit kinase
VDBG_04162
Protein kinases [BR:
val01001
]
Serine/threonine kinases: CMGC group
CDK family
VDBG_04162
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
CTDK-I complex
VDBG_04162
RNA polymerase I system
VDBG_04162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
Motif
Other DBs
NCBI-GeneID:
9534852
NCBI-ProteinID:
XP_003006209
UniProt:
C9SG39
LinkDB
All DBs
AA seq
792 aa
AA seq
DB search
MSGRGSHRGGFNARHQAHNAFAGNHGYSDPYQYYHPPPHFPPNPYINSPNMSPYDMGGWG
GSPHHQYPPQYPQGPQGMYPPQNGPQGQYPPSNPYSPPPSAPTGPMQQYGRGSNFRGGSS
GFRGNQFSGARGGYRGNNFKSAQWNASQTIGGRGSSAQGDDAKSQKSSNSAVASVKSDKD
DFEEQPNSFRPSKDLQVEDTSPPVISDDKEMAPPTRPPPSGPAAQSPASSVSSKFSFAFK
ASAKPTPAVPKPEISQKFNALPPKKEPTQQTDDKDTNNRDREREHEHRAREDRERERDRE
RDQERDRDRERDRERDRRDREYRERDRRERDYRERDHRERDIPRGAPTEPASARGRQDAR
HHQQPPPPGPKAAPPPPAPKTRIVKQKMKRLKPRLSLPPDLVKSESVYFRKPGNESVVGS
GTYGKVFKGLHCYTKDLVALKKIRMEGEKDGFPVTAVREIKLLQSLRHPNVVELKEVMVE
KNDCFMVFEYLSHDLTGLLNHPSFKLDAAQKKHLARQVFEGLDYLHVRGVLHRDLKAANI
LVSSDGILKLADFGLARFYAKRHQLDYTNRVITIWYRSPELLLGETRYGPACDMWSTACI
LMEIFTRHAIFPGDGGEISQLDKIYNVMGTPNKAEWPGLIDMPWFELLRPGYRRASSFAA
KYRDKLTPAAYDLIWSIFKYDPAKRPSAAEALQHTYFMTEEPPARQAIELANLDGDWHEL
ESKALRKENERKEREARHAARSKDGRDHRQKEKDRKRENETHDQRGDAKRLHVEGKPPQP
VDHATAAAAHKA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacgtggcagccaccgtggaggcttcaatgctcgccaccaggcgcacaacgct
tttgctggcaatcatgggtatagtgacccctatcagtactatcaccctcccccccacttc
cctccgaacccctacatcaactcacctaacatgtctccctacgacatgggcggttggggt
ggctctccccaccaccagtatccccctcagtatccacagggacctcagggcatgtatccg
ccgcaaaacgggccccaaggacaatatccaccctcgaacccatattcacctcccccatct
gccccaacaggcccgatgcagcaatatggcagaggtagcaacttccgcggaggcagttca
ggcttccgaggcaatcaattcagtggtgcacgtggaggctaccgcgggaacaatttcaag
agcgcgcagtggaacgcttcacaaacgattggaggtcggggctcgtctgcgcaaggggac
gatgccaagtcacagaagtcatccaattccgccgtcgcaagcgtcaagtcggacaaagac
gatttcgaagagcaaccaaattcctttcgtccgtccaaagacctccaggtcgaagacacg
tcgccccccgtgatctcagatgataaggaaatggctcctcccacgcggcctcctccatct
ggtccagcagcacaatctccggcgtcgtcggtgtcgtcaaagttcagttttgcatttaag
gcatctgcaaaacccactcccgcggtaccgaaaccagagatatctcagaaattcaatgct
ttgcctccaaagaaagagccgactcagcaaactgacgataaagataccaacaaccgcgat
cgggaacgggaacacgagcacagagctcgagaggaccgggaacgggagcgagaccgggag
cgagaccaagagcgtgaccgcgatcgtgaacgtgatcgcgaaagagaccgtcgtgatcgc
gagtaccgggaacgcgaccgtcgcgagcgggactaccgcgaacgagaccatcgtgagcgc
gacattccacgcggcgcaccaacagaaccggcatctgctagaggaaggcaagacgcaagg
catcatcaacaaccaccacctccgggtccgaaggcagcaccaccgcctcccgcccccaag
actcggattgtgaagcaaaagatgaagcgtctcaagccgcggctgagcttaccaccagat
ctcgtcaagtccgaatcagtctactttcgaaagcctggcaacgagtcggttgttggttct
ggtacctatggcaaggtgttcaaaggtctacactgctacaccaaggatctggttgcactg
aagaagattcggatggagggcgaaaaggacgggttccctgtgacggctgtccgcgagatc
aaactcctccagtcgctccgacaccccaacgttgtcgagctcaaggaggtcatggtggag
aagaatgactgtttcatggtcttcgagtatctttctcacgacttgacgggcttgctcaat
catccttccttcaaactcgatgctgcccagaaaaagcatcttgccaggcaggttttcgaa
ggcctcgactatcttcatgttcgcggcgttttgcacagagatctcaaagctgccaacatc
ctggtcagcagcgacggaatcctcaagcttgccgactttggtctggcacgcttctacgcc
aaacggcatcagctcgactatacaaaccgtgtcatcacgatatggtatcgttctcctgag
cttctcttgggagagacgcgatacggcccagcttgcgacatgtggagcacggcttgtatc
ctgatggaaatcttcacgcgccacgccatatttcctggcgacggtggcgagatcagtcaa
ctcgacaagatttacaatgtcatggggaccccgaacaaagctgaatggcccggtcttatc
gacatgccctggttcgaactcttgcggccaggttaccgacgggccagttcttttgccgcc
aagtacagggacaagctcacacccgccgcttacgacttgatttggtccatcttcaaatat
gacccagcgaagcgcccgagtgcagccgaagctcttcagcacacatactttatgaccgag
gaaccgcctgcgcgtcaagccattgagctcgcaaacttggatggtgactggcatgagctt
gagtcgaaagcactccgcaaggagaatgagcggaaagagagagaggcccggcacgcagca
cgcagcaaagacggtcgagaccaccgacagaaggagaaagatcgcaagcgtgagaatgag
acgcatgaccagcgcggtgatgccaaacgactgcatgtggagggtaaaccgccgcagcct
gtggatcacgccactgccgctgctgcgcacaaggcctag
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