KEGG   Verticillium alfalfae: VDBG_06896
Entry
VDBG_06896        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
val  Verticillium alfalfae
Pathway
val03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VDBG_06896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_06896
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     VDBG_06896
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 9537460
NCBI-ProteinID: XP_003003334
UniProt: C9SPS1
LinkDB
AA seq 450 aa
MSDVNGRKRKRDGEGKSKPKKKTAIDGDVTEVPGTPIRIKSVKKAKYCPPVIVSAPGVRL
DEDITFRTYQKRQTAGRKSSRRHASEQEITLHSTKHRTVDFTAREEEVDTRGEPYQQEYV
ALYNPKTGGLEVIAAKKMVVRGTVRAKQADEDAMIAPADIKDRKVDLGQTFGTRKAKKII
ESNRINAIGPKRGEQDADGNAITAKLDSAEKATLSHIGQVTSTMASRDELQAAIDESKPV
PRANLEADEVADVYDPKVIIGTDVLKAVPVRDWQEAVEKNENIDLASRYVARRIGRVGKQ
EKPLEKLRIMRYLYFLILFYVTAKDGRQRGTKRVPPKDQLAKNLSPAPQSVIDSIRRKFS
DGGEIRKFHMDLIMTHCAALSCIIDNFETEPRDLREDLRLDSKTMNQYFQEIGAKIGQRK
AAGEAKAQPVAKLAMPLVFPKMSRGAPMRR
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtccgacgtcaacggaaggaaaaggaagagggacggcgagggcaagtcaaagcccaag
aagaagacggccattgatggcgacgtcacagaggtccctggaacgcccattcggatcaag
tccgtcaagaaggcgaagtactgcccgcccgtcatagtgtctgcacctggcgtgcgcctg
gacgaggacatcacgttccgaacctaccagaagaggcagacagccggacgcaagtcgagc
cggcgccatgcctcggagcaggagatcaccctgcactcgacaaagcaccgcactgtcgac
ttcaccgcacgggaggaggaggtcgacacgaggggcgagccttaccagcaggagtacgtc
gccctgtacaaccccaagacgggggggctcgaggtcatcgcggcgaagaagatggtggtg
cgaggcacggtgagggcgaagcaggcagacgaggacgccatgattgcacctgccgacatc
aaggaccgcaaggtggacctcggccagacgttcggcacacgaaaggcgaagaagattatc
gagtcgaaccgcatcaacgccatcggtcccaagcgcggagagcaggacgccgacggcaac
gcgattacggccaagctcgattcggcggagaaggcgacactgtcgcacatcggacaggtg
acgtcgacgatggcgtcgcgcgacgagctgcaggcggcgattgacgagtcgaagccggtg
ccgcgggcgaacctcgaagcggacgaggtagccgacgtgtacgaccccaaggtgatcatc
gggaccgacgtgctcaaggcggtgccggtgcgcgactggcaggaggcggtggagaagaac
gagaacattgacctcgcgtcgcggtacgtggcgcggcgcatcgggcgcgtcggcaagcag
gagaagccgctggagaagctgcgcatcatgcggtacctctacttcctcatcctcttctac
gttacggccaaggacggccgacagaggggcaccaagcgggtgccgccgaaggaccagctc
gccaagaacctgtcgccggcgccgcagtcggtcatcgacagcatccggcgcaagttctcg
gacggcggtgagattcgcaagttccacatggacctcatcatgacgcactgcgcggcgctg
tcgtgcatcatcgacaattttgaaacggagccgagggacctcagggaagacctgcgtctg
gactccaagacgatgaaccagtacttccaggagattggtgccaagattggacagaggaag
gcggctggtgaggccaaggcgcagccagtcgcgaagctggcgatgccgctcgtgttcccc
aagatgagccgtggcgcgccgatgcggcgatga

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