Variovorax sp. PMC12: C4F17_09445
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Entry
C4F17_09445 CDS
T05380
Name
(GenBank) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_09445
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_09445
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_09445
Enzymes [BR:
vam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
C4F17_09445
Amino acid related enzymes [BR:
vam01007
]
Aminoacyl-tRNA synthetase
Class I (A)
C4F17_09445
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C4F17_09445
Prokaryotic type
Other AARSs
C4F17_09445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AVQ81152
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Position
1:2034410..2036224
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AA seq
604 aa
AA seq
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MTSPTDKNGAKTTAAPSNFLRHVIENDLAQGAYAGRKWGGSPGSAAHHAQGMADPAKVRM
RFPPEPNGYLHIGHAKSIWLNFELAKEYGGVCHLRFDDTNPEKEDQEYVDSIRDAVKWLG
YETYLADRPSAPGTLQEHEYFASNYFDFMYEAAEYLIGAGLAYVDEQTADEVRANRGDFN
TPGTDSPFRTRTPEENLARFRAMRDGQVADGAAILRAKIDMASTNINMRDPALYRVRRAH
HHNTGDKWCIYPMYTYAHPIEDALEQITHSICTLEFEDQRPFYDWLLDRLAEGGLVASPH
PRQYEFARLNVTHVMTSKRKLRQLVEEKYVDGWDDPRMPTIAGLRRRGYTPEALRLFCER
SGTTKSGGWIDYASLEAALRDTLDPVAPRAMAVLDPVKLVITNWGELMGGDDSLDDCSAP
VHPHHPEMGKREFKLGREVWIERTDYEEVQPKGFFRLFPGNKVRLKYGHVIECTGGTKDA
DGKLVEVQATLVPDTKSGTPGADAIKVKGNITWVAAADAVQAEVRLYERLFAEANPGSGE
LLDELNKTSLEVCSAFVEPSLAKAEPGIGIQFERHGYFVRDSKGDADGKLVFNRAAGMRD
SWGK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacctccccgaccgacaaaaacggcgccaaaacgaccgctgcaccgagcaatttcctg
cgccacgtgatcgagaacgacctcgcacagggcgcctacgcaggccgcaagtggggcgga
tcgcccggcagcgccgcccaccacgcccagggcatggccgatccggccaaggtgcgcatg
cgcttcccgcccgaacccaacggctacctgcacatcggccacgccaagagcatctggctc
aacttcgagctggccaaggaatacggcggcgtgtgccacctgcgcttcgacgacaccaac
cccgagaaggaagaccaggaatacgtcgattccatccgcgacgcggtgaagtggctcggc
tacgaaacctacctggccgaccgccccagcgcgcccggcacgctgcaggagcacgagtac
ttcgcgagcaactacttcgacttcatgtacgaggccgccgaatacctcatcggcgccggc
ctcgcctacgtggacgagcagaccgccgacgaagtgcgcgcgaaccgcggcgacttcaac
acgcccggcaccgacagccccttccgcacccgcacgcccgaggaaaacctggcgcgtttc
cgtgccatgcgcgacggccaggtcgccgacggcgccgccatcctgcgcgccaagatcgac
atggccagcaccaacatcaacatgcgcgaccccgcgctgtaccgcgtgcgccgtgcccac
caccacaacaccggcgacaagtggtgcatctacccgatgtacacctacgcgcaccccatc
gaagacgcgctggagcagatcacccacagcatctgcacgctcgagttcgaagaccagcgc
cccttctacgactggctgctcgaccgcctcgccgaaggcggcctcgtcgccagcccgcac
ccgcgccaatatgaattcgcgcgcctcaacgtcacccacgtgatgaccagcaagcgcaag
ctgcgccagctggtcgaggagaaatacgtcgacggctgggacgacccgcgcatgcccacc
atcgccggcctgcgccgccgcggctacacgcccgaagcgctgcgcctgttctgcgagcga
agcggcaccaccaagtcgggcggctggatcgactacgccagcctcgaggccgcgctgcgc
gacaccctcgaccctgtcgctccacgggccatggccgtgctcgacccggtcaagctcgtc
atcaccaactggggcgagctgatgggcggcgacgactcgctcgacgactgctcggccccc
gtgcatccgcaccaccccgaaatgggcaagcgcgaattcaagctcggccgcgaagtgtgg
atcgagcgcaccgactacgaagaagtgcagcccaagggcttcttccgcctgttccccggc
aacaaggtgcggctgaagtacggccacgtcatcgaatgcaccggcggcaccaaggacgcc
gacggcaagctcgtcgaagtgcaggccacgctggtgcccgacaccaagagcggcacgccc
ggcgcggacgcgatcaaggtcaagggcaacatcacctgggtggccgccgccgatgcggtg
caggccgaagtgcggctgtacgaacggctcttcgcggaagccaacccgggcagcggcgag
ctgctggacgaactgaacaagaccagcctggaagtgtgctcggcgttcgtcgagccctcg
ctggcaaaggccgagccaggcatcgggatccagttcgagcggcacgggtacttcgtgcgc
gattcgaagggcgacgccgatggcaagctggtgttcaaccgcgcagcgggcatgcgggac
agctggggcaaataa
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