Variovorax sp. PMC12: C4F17_11135
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Entry
C4F17_11135 CDS
T05380
Name
(GenBank) aspartate aminotransferase family protein
KO
K00821
acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.11
2.6.1.17
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00220
Arginine biosynthesis
vam00300
Lysine biosynthesis
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01210
2-Oxocarboxylic acid metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
vam_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4F17_11135
00220 Arginine biosynthesis
C4F17_11135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_11135
Enzymes [BR:
vam01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.11 acetylornithine transaminase
C4F17_11135
2.6.1.17 succinyldiaminopimelate transaminase
C4F17_11135
Amino acid related enzymes [BR:
vam01007
]
Aminotransferase (transaminase)
Class III
C4F17_11135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
Peptidase_S41_N
Motif
Other DBs
NCBI-ProteinID:
AVQ81457
UniProt:
A0A2P1V8E9
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All DBs
Position
1:2396475..2397683
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AA seq
402 aa
AA seq
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MSATAQPTSPHVMNTYGRLPIALSHGQGCRVWDTTGKAYIDGLGGIAVNTLGHNHPELVP
ALQDQLTKLIHSSNYYHVPGQEQLAAKLTELSGLTNVFFCSTGLEANEAALKLARKYGHD
KGIERPEIVVYEAAFHGRSIATLSATGNPKVQAGFGPLVEGFIRVPLNDIEALKKATEGN
PNVVAVFFETIQGEGGIHPMRWEYLKQVRALCDERDWLMMIDEVQCGMGRTGKWFAHQWA
GIKPDVMPLAKGLGSGVPIGAVVAGPKAAGIFAPGNHGTTFGGNPLAMRAGVETIRIMEE
HKLLENAATVGAHLKAALEREIGGLPGVKEVRGQGLMLGIELDRPCGVILNRACDAGLLL
SVTADKVIRLVPPLILTIAEADEIVAILAPIVKAFLSEPAPQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaccgcccagcccacctcgccccacgtcatgaacacctacggtcgcctgccg
atcgcactgtcgcacggccagggctgccgagtctgggacaccacgggcaaggcctacatc
gacggcctcggcggcattgccgtcaacaccctgggccacaaccaccccgagctggtgccc
gccctgcaggaccagctgaccaagctgatccacagctccaactactaccacgtgcccggc
caggaacagctggccgccaagctgaccgaactgtcgggcctcaccaacgtcttcttctgc
tccaccggcctcgaagccaacgaagccgccctgaagctggcccgcaagtacggccacgac
aagggcatcgagcgccccgagatcgtcgtctacgaagccgccttccacggccgcagcatc
gccacgctgtcggccaccggcaaccccaaggtgcaggccggcttcggcccgctggtcgag
ggcttcatccgcgtgccgctgaacgacatcgaggcgctgaagaaggccaccgagggcaac
ccgaacgtggtcgccgtgttcttcgagaccatccagggcgaaggcggcatccacccgatg
cgctgggaatacctcaagcaggtgcgcgcgctgtgcgacgagcgcgactggctcatgatg
atcgacgaagtgcagtgcggcatgggccgcaccggcaagtggttcgcccaccagtgggcg
ggcatcaagcccgacgtgatgccgctggccaagggcctgggttcgggcgtgccgatcggc
gccgtggtggccggccccaaggccgccggcatcttcgcccccggcaaccacggcaccacc
ttcggcggcaacccgctggccatgcgcgccggcgtcgagaccatccgcatcatggaagag
cacaagctgctcgagaacgccgccaccgtgggcgcccacctgaaggccgcgctggagcgc
gagatcggcggcctgccgggcgtgaaggaagtgcgcggccagggcctgatgctgggcatc
gagctcgaccgcccctgcggcgtgatcctgaaccgcgcctgcgacgccggcctgctgctg
agcgtgacggccgacaaggtgatccgcctcgttccgccgctcatcctgaccatcgccgag
gccgacgagatcgtcgccatcctcgcgcccatcgtcaaagccttcctgtcggagcccgca
ccccaatga
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