Variovorax sp. PMC12: C4F17_30490
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Entry
C4F17_30490 CDS
T05380
Name
(GenBank) 2-oxoacid:acceptor oxidoreductase subunit alpha
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00010
Glycolysis / Gluconeogenesis
vam00020
Citrate cycle (TCA cycle)
vam00620
Pyruvate metabolism
vam00650
Butanoate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01210
2-Oxocarboxylic acid metabolism
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C4F17_30490
00020 Citrate cycle (TCA cycle)
C4F17_30490
00620 Pyruvate metabolism
C4F17_30490
00650 Butanoate metabolism
C4F17_30490
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
C4F17_30490
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
C4F17_30490
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
APOBEC2
APOBEC_C
Motif
Other DBs
NCBI-ProteinID:
AVQ85355
UniProt:
A0A2P1VJJ1
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Position
2:666679..668505
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AA seq
608 aa
AA seq
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MTQQQIEAVNDFVIKFANVNGSGSASANELFAKAILRMGVPVSPRNIFPSNIQGLPTWYE
VRVTEDGHLGRRGGTDMMVAMNPQTWDADVAELAPGGYLFYDSTRPLPPSRFRDDIRVIG
MPLTEICNAVYQDPRQRQLFKNIVYVGALAVLLGIEPEVVEKLFGEQYKGKEKLLASNVQ
ALHLGCDFARENLREPVGLQVRRADRVGGRIFVDGNSAAALGCVYGGATVAAWYPITPSS
SVAEAFQKYCSKFRVDPATGQHRFAIVQAEDELASIGMVVGAGWNGARAFTATSGPGISL
MAEFIGLAYFAEIPITLINVQRGGPSTGMPTRTQQADILACAYASHGDTKHVLLFPEDPH
ECFAHAAAALDLADRLQTPVFLMTDLDIGMNQRLCEPFAWDDSQAYDRGKVMSADELEAG
RDFGRYKDVDGDGIPWRTLPGTHPTKGSYFTRGTTRDAYARYSERGPDYIYNMERLLKKF
ATAATLVPQPVLRPAARKTALGVIYFGSTSPSMHEALDALEAQGIHLNAMRLRAFPFPES
VAQFVAQHEQVFVVEQNRDAQMRSLLVNELNADPARLIRVLHFDGTPITARFIVQAIATH
VHPTKEAA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacagcagatcgaggcggtcaacgacttcgtcatcaagttcgccaacgtcaac
ggctcgggctcggcttcggccaacgagctgttcgccaaggccatcctgcgcatgggcgtg
ccggtgagcccgcgcaacatcttcccgagcaacatccagggcctgccgacctggtacgag
gtgcgcgtgaccgaagacgggcacctgggtcggcgcggcggcacggacatgatggtggcg
atgaacccgcagacctgggacgccgacgtggccgagctggcgccgggcggctatcttttc
tacgacagcacccggccgctgccgccttccaggtttcgcgacgacatccgcgtgatcggc
atgccgctcaccgaaatctgcaacgccgtctatcaagacccgcgccagcggcagctgttc
aagaacatcgtctacgtgggcgccctggccgtcctgctgggcatcgagcccgaggtggtc
gagaagctgttcggcgagcagtacaagggcaaggaaaagctgctggcctccaacgtgcag
gcgctgcacctgggctgcgacttcgcgcgggagaacctgcgcgagccggtggggctgcag
gtgcggcgcgccgaccgggtgggcgggcgcatcttcgtggacggcaacagcgccgcggcg
ctgggctgcgtgtatggcggcgccacggtcgcggcctggtacccgatcacgccgtcgtcg
tcggtggccgaggccttccagaagtactgcagcaagttccgggtggacccggccaccggc
cagcaccgcttcgccatcgtgcaggcggaggacgagctggcctcgatcggcatggtggtc
ggcgcgggctggaacggcgcgcgcgccttcaccgcgacctcggggcccggcatttcgctg
atggccgaattcatcggcctggcctacttcgcggagattccgatcaccttgatcaacgtg
cagcgcggcgggccctccaccggcatgcccacgcgcacgcagcaggccgacatcctggcc
tgcgcctatgcctcgcacggcgacaccaagcacgtgctgctgtttcccgaggacccgcac
gagtgcttcgcacacgcggcggcggcgctggacctggccgaccggctgcagacgcccgtg
ttcctgatgaccgacctggacatcggcatgaaccagcggctgtgcgagccctttgcctgg
gacgacagccaggcctacgaccgcggcaaggtcatgagcgccgatgagctggaggcgggc
cgcgatttcggccgctacaaggacgtggacggcgacggcattccctggcgcacgctgcca
ggcacgcacccgaccaagggcagctacttcacgcgcggcaccacgcgcgacgcctatgcc
cggtattcggagcgcgggccggactacatctacaacatggagcggctgctgaagaagttc
gcgaccgcggccacgctggtgccgcagccggtgctgcggcccgcagcccgcaagaccgcg
ctgggcgtgatctatttcggctcgaccagcccgtcgatgcacgaggcgctggatgcgctc
gaagcgcagggcatccacctcaacgccatgcggctgcgcgcctttccctttcccgagagc
gtggcgcagttcgtggcgcagcacgagcaggttttcgtggtcgagcagaaccgcgacgcg
cagatgcgcagcctgctggtcaacgagctaaatgccgatccggcacggctgatccgggtg
ctgcatttcgacggcacgccgatcaccgcgcgcttcatcgtgcaggccatcgccacgcat
gttcatccgacgaaggaggcggcatga
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