Variovorax paradoxus S110: Vapar_0326
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Entry
Vapar_0326 CDS
T00916
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00907
Pinene, camphor and geraniol degradation
vap01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Vapar_0326
Enzymes [BR:
vap01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
Vapar_0326
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACS16989
UniProt:
C5CY85
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Position
1:complement(347610..349559)
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AA seq
649 aa
AA seq
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MSFGKILIANRGEIAVRVMRTARAMGCRTVAVYSSADADAEHVRQADQSVCIGEPLPAQS
YLDIAAIVEAARSSGAQAVHPGYGFLAENADFAQACRDAGLVFVGPSPEAIRAMGDKAAA
KRLMQAAGVPCIPGYQGEDQSAATLAAEAARIGWPVMIKATAGGGGRGMRLAPSAESFAE
LLQSAQSEALHAFGDANVILELAIAAPRHIEIQVFADRHGNAIHLGERDCSVQRRHQKLI
EESPSPAVSEALRERMGATAVAATRAIGYEGAGTLEFLLDADGQYWFMEMNTRLQVEHPV
TEAVTGLDLVELQLRVAAGEVLPLAQQDVRLRGHAIEVRLCAEDPRQGFMPQSGTLAAWR
PSPALRIEHALRDGAAVPPFYDSMIAKLVAHGPTREEARRRLVAGLQDTVALGLATNQRF
LQRALTHPVFAGGSATTAFIAEHADALLAPDPAMARRTAWLAALLLQLGERGWPSPLAHT
LPNALRFSLDGQVHAARVTPRGAGCFDIALDAAAPVPIELLSLTGDGALRFSCDGVSERA
LAVRESATRLWLHFHGQAFDLQDLTHAAVPRAEAAGGDGLLRASMNGRVIALLVAEGEAV
AAGQPIATLEAMKMEHVHCAPRAGRVAALHVAVGAQVAARHVVAEIADA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggcaagatcctcatcgccaaccgcggcgaaattgcagtgcgcgtgatgcgc
accgcgcgcgccatgggctgccgcacggtcgccgtgtattcgagcgccgatgccgatgcg
gagcacgtgcggcaggccgaccagtccgtgtgcatcggcgagccgctgcccgcgcagagc
tacctggacatcgccgcgatcgtcgaagccgcgcgttcgagcggcgcgcaagcggtccat
cccggctacggcttcctcgccgagaacgcggatttcgcgcaagcctgccgcgatgcgggc
ctcgtcttcgtcggcccctcgccagaggccatccgcgccatgggcgacaaggccgcagcg
aagcggctgatgcaggctgccggcgtgccctgcattcccggctaccagggcgaagaccag
agtgcggccacgctcgctgccgaagccgcgcgcatcggctggcccgtgatgatcaaggcc
acggccggcggcggcgggcgcggcatgcggctcgcgccatcggccgagtcctttgccgag
ctgctgcagagcgcgcagtccgaggcgctccatgccttcggcgatgcgaacgtgatcctg
gagctcgccatcgccgcgccgcgccacatcgagatccaggtgttcgccgaccggcacggc
aacgccatccacctgggtgagcgcgactgctcggtgcagcgccggcaccagaagctgatc
gaggaatcgccctcgcccgccgtctccgaggccttgcgcgaacgcatgggcgccacggcc
gtggcggccactagggccatcggctacgaaggcgcgggcacgctcgaattcctgctcgat
gccgacgggcagtactggttcatggagatgaacacgcggctgcaggtggagcatccggtg
accgaggccgtgacagggctcgacctggtcgagctgcagctgcgcgtggcggcgggcgag
gtgctgccgcttgcacagcaggacgtgcgcctgcgcggccatgcgatcgaggtgcggctg
tgtgccgaagatccgcggcagggcttcatgccgcaaagcggcacgctcgccgcatggcgg
ccttcgccggcactgcgcatcgagcatgcgctgcgggacggcgccgcagtgccgcccttc
tacgattcgatgatcgccaagctcgtggcccatggcccaacgcgcgaggaagccaggcgc
cggctggtcgcggggctgcaggacacggtggccctgggcctggcgaccaaccagcgcttc
cttcagcgcgcgctgacgcatcccgtgtttgccggcggttcggcgacgacggcgttcatt
gccgaacacgccgacgcattgctggcacccgaccccgccatggcgcgccgcaccgcatgg
ctcgcggcgctgctgctccagctgggcgaacgcggatggccctcgccgctcgcgcacacg
ctgcccaacgcgctgcgcttctcgctcgacggccaggtgcacgccgcccgcgtgacgccg
cggggcgcgggctgcttcgatatcgcgctcgatgcggccgcgccggtaccgatcgagctg
ctttcgctgaccggcgatggcgccttgcgcttctcctgcgatggcgtctcggagcgggcc
ttggcggtgcgcgaatccgcgacgcgcctgtggctccacttccatggccaggccttcgac
ctgcaggacctcacacatgccgccgtgccgcgcgccgaggccgcgggcggcgacggcctg
ctgcgcgcctcgatgaacggccgcgtcatcgcgctgctggtggccgaaggcgaggccgtc
gctgccggccagccgatcgccacgctcgaggcgatgaagatggaacatgtgcactgcgcg
ccgcgcgcgggccgcgtcgccgcattgcatgtggcggtgggtgcgcaggtggccgcgcgc
catgtggtggccgagatcgccgacgcatga
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