KEGG   Variovorax paradoxus S110: Vapar_1225
Entry
Vapar_1225        CDS       T00916                                 
Name
(GenBank) short-chain dehydrogenase/reductase SDR
  KO
K00065  2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00040  Pentose and glucuronate interconversions
vap01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Vapar_1225
Enzymes [BR:vap01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.127  2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
     Vapar_1225
SSDB
Motif
Pfam: adh_short_C2 adh_short KR Sacchrp_dh_NADP Epimerase GDP_Man_Dehyd NAD_binding_7 3Beta_HSD F420_oxidored NmrA 3HCDH_N RmlD_sub_bind ADH_zinc_N AdoHcyase_NAD
Other DBs
NCBI-ProteinID: ACS17876
UniProt: C5CQQ0
LinkDB
Position
1:complement(1338172..1338927)
AA seq 251 aa
MFDLTGKAALVTGGNGGIGLGMAQGLAKAGARVVIAARNMQKSAAAVEALRALGSDSFAL
EVDVADEASVQKAVDEAAARCGRLDILVNNAGTTVRKPVDQLALDEWRLVLDTNLTSAFL
CSRAAHPHLKAAGGKIINIGSMMSIFGAPYAPAYAASKAGIVQLTKSTALSWAADNIQVN
AILPGWFETELTDGARSQIPGLYDRVVARAAAGRWGQPADIAGTAVFLASAASDYVTGTA
IPVDGGFSISG
NT seq 756 nt   +upstreamnt  +downstreamnt
atgttcgatctcacaggaaaagcagcgctcgtcaccggcggcaacggcggcatcggcctg
ggcatggcccaggggctggccaaggccggcgcccgcgtcgtcattgccgcgcgcaacatg
cagaagtcggctgccgcggtcgaggcgctccgggccctgggcagcgacagcttcgcgctc
gaagtcgacgtggccgacgaagcctcggtgcagaaggcggtcgacgaagcagccgcgcgc
tgcggccgcctcgacatcctcgtcaacaacgccggcaccaccgtgcgcaagcccgtcgac
cagctcgcgctggacgaatggcgcctggtgctggacaccaacctgaccagcgcctttctc
tgcagccgcgctgcgcatccgcacctgaaggcggccggcggcaagatcatcaacatcggc
tcgatgatgtcgatcttcggcgcaccctacgcaccggcctatgccgcgagcaaggcgggc
atcgtgcagctcaccaagtcgaccgcgctttcatgggcggccgacaacatccaggtcaat
gccatcttgccgggctggttcgagaccgagctgaccgacggcgcccgcagccagatcccg
ggcctctacgaccgcgtggtggcccgcgccgctgccggacgctggggccagccggccgac
atcgccggcactgcggtgttccttgcgagcgccgcctccgactacgtgaccggcaccgcg
atcccggtcgacggcggattctccatttctggctga

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