Variovorax paradoxus S110: Vapar_3324
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Entry
Vapar_3324 CDS
T00916
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00362
Benzoate degradation
vap01100
Metabolic pathways
vap01120
Microbial metabolism in diverse environments
vap01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vapar_3324
Enzymes [BR:
vap01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Vapar_3324
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
LppA
Motif
Other DBs
NCBI-ProteinID:
ACS19942
UniProt:
C5CRZ1
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All DBs
Position
1:complement(3503628..3504836)
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AA seq
402 aa
AA seq
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MSIFEGFLSTSETLSAFSDHNFVGAMLRFEAALTRAQAALGLVPETAAHSIVGSCKVELF
DVAKIVRDSGRAGSVAIPLVKALKEAVGLFNPAAVPFVHFGSTSQDVIDTAMALVTREGI
ALIEADVDRAIEALLQHATQHAATPILARTLMQPASVTSFGLKCAGWAAPLVRSRARLRG
AARHALSVQLGGAVGTLSQMKGQGAAVVQRVADELGLGNAGATWHTQRDEWVALGCELGL
LTGSLGKIARDIALMGQYEVGEVAEPTEPGRGGSSAMPHKRNPVAAMVALAAAQRAPQRV
AALLAAMPQEHERALGGWQAELAEWPQLLMSAHGSARALASALPGLQIDAARMRANIDTL
RAELPREAADEWFDPALAGPAGETALRQVAALRAQLIAKDTP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcgaaggcttcctttccacgtccgagacgctttccgccttcagcgaccac
aacttcgtcggcgcgatgctgcgcttcgaggccgcattgacccgcgcgcaggccgcgctc
gggctggtgccggagacggccgcgcattcgatcgtcggcagctgcaaggtcgagctgttc
gacgtggccaagatcgtgcgcgacagcggccgcgccggcagcgtcgcgattccgctggtc
aaggccttgaaggaggccgtgggcctgttcaatcccgccgccgtgcccttcgtgcatttc
ggcagcaccagccaggacgtgatcgacaccgcaatggcgctggtcacgcgcgaaggcatc
gcgctgatcgaggccgatgtcgaccgcgccatcgaggcgctgctgcagcacgccacgcag
catgcggccacgccgatccttgcgcgcacgctgatgcagcctgcgtcggtcacgagcttc
ggcctcaagtgcgccggctgggccgcgccgctggtgcgcagccgggcccgcctgcggggc
gccgcgcgccatgcgctgagcgtgcagctcggcggcgccgtcggcacgctctcgcagatg
aaggggcagggcgcggccgtcgtgcagcgcgtggcggacgagctcggcctcggcaatgcc
ggcgccacctggcacacgcagcgcgacgaatgggtcgcgctcggctgcgagctggggctg
ctcacgggcagcctcggcaagatcgcgcgcgacatcgcgctcatgggccagtacgaggtc
ggcgaggtggcagagcccaccgagccgggccgcggcggctcctccgcaatgccgcacaag
cgcaacccggtggcggcgatggtggcactggccgcggcccagcgcgcgccgcagcgggtg
gccgcactgttggccgcgatgccgcaggaacacgagcgtgcgctcggcggctggcaggcc
gaactggccgaatggccgcagctgctgatgtcggcgcacggcagcgcgcgtgcgttggcc
agtgcgctgcccggcctgcagatcgacgcggcgcgcatgcgcgccaacatcgacaccctg
cgcgcggagctgccgcgcgaggcggcggacgaatggttcgaccccgcgctggccggcccg
gccggcgaaaccgcgctgcggcaagtcgcggcactgcgcgcccaactgattgcgaaagac
accccctga
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