Variovorax paradoxus S110: Vapar_3470
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Entry
Vapar_3470 CDS
T00916
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K22589
threo-3-hydroxy-L-aspartate ammonia-lyase [EC:
4.3.1.16
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Vapar_3470
Enzymes [BR:
vap01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.16 threo-3-hydroxy-L-aspartate ammonia-lyase
Vapar_3470
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Gene cluster
GFIT
Motif
Pfam:
PALP
adh_short
Motif
Other DBs
NCBI-ProteinID:
ACS20087
UniProt:
C5CSY0
LinkDB
All DBs
Position
1:complement(3654355..3655311)
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AA seq
318 aa
AA seq
DB search
MQLPTYDDVIAAAARLKGHAHRTPVLQSQTADERWGASFFFKCENFQRMGAFKFRGAFNA
LSKFDAAQRKGGVIAFSSGNHAQAIALSARLLSMPAVIVMPKDAPAAKVAATKGYGAEVV
MYDRFTEDREALTKRLAQERGMTMIPPYDHPDVLAGQGTAVKELIEETGPLDQLFVCLGG
GGLLSGSALSARALAPGCKVYGVEPEAGNDGQQSLRAGKIVHIETPKTIADGAQTQHLGQ
YTFGIIKRDVDDIFTVTDPQLVDAMRFFAERMKIVVEPTGCLAFAGAIAADKAIAGQRVG
IVVSGGNVDLSRYAALLA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcaactacctacctacgacgacgtcatcgccgcggccgcgcggctcaagggccacgcc
caccgcacgcctgtgctgcaatcgcagacggccgacgagcgctggggcgccagcttcttc
ttcaagtgcgagaacttccagcgcatgggtgccttcaagttccgcggtgcgttcaatgcg
ctgtcgaagttcgacgccgcgcagcgcaagggcggcgtgatcgcgttctcttcgggcaac
catgcgcaggccattgcgctgtcggcccggctcttgtcgatgccggccgtgatcgtcatg
cccaaggacgcgcccgcggccaaggttgcggccacgaagggctacggcgccgaagtggtg
atgtacgaccgcttcaccgaagaccgcgaggcgctcacgaagcggctcgcacaggaacgc
ggcatgacgatgatcccgccctacgaccacccggacgtgctcgcggggcagggcacggcg
gtgaaggaactcatcgaggagaccggtccgctcgaccagctgttcgtgtgcctgggcggc
ggcgggctgctgtcgggttcggcgctgtcggcgcgcgcgctggcgcccggttgcaaggtc
tacggcgtggagcccgaggcgggcaacgacggccagcaatcattgcgcgcgggaaagatc
gtgcacatcgaaacgcccaagaccattgccgacggcgcgcagacgcagcacctggggcag
tacaccttcggcatcatcaagcgcgacgtggacgacatcttcaccgtgaccgacccgcag
ctcgtcgatgcaatgcgcttctttgccgagcgcatgaagatcgtggtggagccgaccggt
tgcctcgccttcgcgggcgcgattgccgcggacaaggccatcgcgggccagcgcgtgggc
atcgtggtcagcggcggcaacgtcgacctctcgcgctacgctgcgttgctcgcgtag
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