Variovorax paradoxus S110: Vapar_4926
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Entry
Vapar_4926 CDS
T00916
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00860
Porphyrin metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01240
Biosynthesis of cofactors
Module
vap_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Vapar_4926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_4926
Enzymes [BR:
vap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Vapar_4926
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Vapar_4926
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ACS21530
UniProt:
C5CP66
LinkDB
All DBs
Position
1:5234693..5235682
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AA seq
329 aa
AA seq
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MYPAGRPRRLRRDSFTRNLVREHALTAHDLIYPVFVQEGEKKRDAVASMPGVDRLSLDLL
LPVAEQCVEAGIPVMALFPVIDAGLKTPAGDEAFNPEGLIPRVVAALKSRFPELGVMTDV
ALDPYTSHGQDGLLDDTGYILNDATVEVLVKQALTQSQAGVDIVAPSDMMDGRIGAIRTA
LEARGDIHTRIMAYSAKYASAFYGPFRDAVGSAATLGKSNKKVYQMDPGNSDEALREVGL
DIAEGADMVMVKPGMPYLDIVRRVKDEFRVPTFAYQVSGEYAMLKAAAQNGWLDHDAVVL
ESLLAFKRAGADGVLTYFALDAARLLQKQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccgccggccggccgcgccgcctgcgccgcgacagcttcacccgcaacctcgtc
agggagcatgcgctgacggcgcacgacctcatctacccggtgttcgtgcaggaaggcgag
aaaaagcgcgacgccgtggcgtcgatgcccggcgtggatcgcctgagcctcgacctgctg
ctgccggtggccgagcagtgcgtggaggccggcatcccggtgatggcgctctttccggtg
atcgatgccggcctcaagacgcccgcgggcgacgaggccttcaatcccgaggggctgatt
ccgcgcgtggtcgcggcgctgaagtcgcgctttccggagctcggcgtgatgaccgacgtg
gcgctcgacccctacaccagccacgggcaggacggcctgctcgacgacaccggctacatc
ctcaacgacgccaccgtggaagtgctggtgaagcaggcgctcacacagtcgcaagccggc
gtggacattgtggcgcccagcgacatgatggacgggcgcattggcgcgatccgcaccgcg
ctggaagcccgcggcgacatccacacccgcatcatggcctacagcgccaagtacgcgagc
gccttctacggcccgttccgcgatgccgtgggctcggccgcgacgctcggcaagagcaac
aagaaggtctaccagatggacccgggcaacagcgacgaggcgctgcgcgaagtgggcctg
gacattgccgagggcgccgacatggtgatggtcaagcccggcatgccctacctggacatc
gtgcgccgcgtgaaggacgaatttcgcgtacccaccttcgcctaccaggtgagcggcgaa
tacgcgatgctcaaggccgcggcccagaacggctggctcgaccacgatgcggtggtgctc
gaaagcctgctcgccttcaagcgcgccggcgccgacggcgtgctcacctactttgcgctc
gacgccgcgcggttgctgcaaaaacaatag
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