Variovorax paradoxus S110: Vapar_5477
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Entry
Vapar_5477 CDS
T00916
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5477
00020 Citrate cycle (TCA cycle)
Vapar_5477
00620 Pyruvate metabolism
Vapar_5477
00650 Butanoate metabolism
Vapar_5477
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Vapar_5477
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Vapar_5477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_C
PFO_beta_C
Motif
Other DBs
NCBI-ProteinID:
ACS22072
UniProt:
C5D0H6
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All DBs
Position
2:complement(177559..178614)
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AA seq
351 aa
AA seq
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MTYLAKPRLHHPTLATNKVGYTRRDYEGKISTLCAGCGHDSISAAIIEACWELDIEPHRV
AKLSGIGCSSKTPDYFLGASHGFNTVHGRMPSVLTGANLANRDLLYLGVSGDGDSASIGL
GQFAHAMRRGVRMAYIVENNGVYGLTKGQFSATADQGSRSKKGVVNSDSPVDLVAMALQL
GASYVGRGFSGNKAQLVPLIKGAISHGGAAFIDVISPCVAFNNHPGSTKSYDYVREHNEA
VSRIDFISGREEITVDVAPGEVMDVRQHDGTLLRLRSLHPGYDPGDRHAAMAHMQRHQEM
GEVVTGLLFVDPLASDLHTALNTSDRPLNALGPAELCPGAEALARLNASLR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacctacctcgccaaaccccggctgcaccatccgacgctggccaccaacaaggtcggc
tacacgcggcgcgactacgagggcaagatctccacgctgtgcgccggctgcggacacgac
tccatctccgccgccatcatcgaggcctgctgggagctggacatcgagccgcaccgcgtg
gccaagctctcgggcatcggctgcagctccaagacgccggactacttcctgggcgcctcg
cacggcttcaacacggtgcacggccgcatgcccagcgtgctgaccggcgccaacctggcc
aaccgcgacctgctgtacctgggcgtctcgggcgacggcgattcggcgtccatcggcctg
ggccagttcgcccacgcgatgcggcgcggcgtgcgcatggcctacatcgtggagaacaac
ggcgtctacggcctgaccaagggccagttctcggccacggccgaccagggctccaggagc
aagaagggcgtggtcaacagcgacagcccggtggacctggtggccatggcgctgcagctg
ggcgcgagctacgtggggcggggcttctcgggcaacaaggcgcagctggtgccgctcatc
aaaggggcgatcagccacggcggcgccgccttcatcgacgtgatcagcccctgcgtcgcc
ttcaacaaccacccgggcagcaccaagagctacgactacgtgcgcgagcacaacgaggcg
gtcagccgcatcgacttcatcagcgggcgggaagagatcaccgtcgacgtggcgccgggc
gaagtgatggacgtgcgccagcacgacggcaccctgctgcgcctgcgcagcctgcatccg
ggctacgaccccggcgaccgccatgccgccatggcccacatgcagcggcaccaggagatg
ggcgaggtggtgaccgggctgctcttcgtcgatccgctggccagcgacctgcacacggcg
ctcaacaccagcgaccggccgctcaatgcgctgggcccggccgagctgtgccccggcgcc
gaggcgctcgcgcggctcaacgcgtccttgcgctga
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