Variovorax paradoxus S110: Vapar_5478
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Entry
Vapar_5478 CDS
T00916
Name
(GenBank) pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5478
00020 Citrate cycle (TCA cycle)
Vapar_5478
00620 Pyruvate metabolism
Vapar_5478
00650 Butanoate metabolism
Vapar_5478
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Vapar_5478
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Vapar_5478
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ACS22073
UniProt:
C5D0H7
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Position
2:complement(178611..180452)
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AA seq
613 aa
AA seq
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MSAIPQIEAVNDFVIKFANVNGSGSASANELFAKAILRMGVPVSPRNIFPSNIQGLPTWY
EVRVTEDGHLGRRGGTDMMVAMNPQTWDADVAELEPGGYLFYDSTRPLPPSKFRSDVRVI
GMPLTEICNAVYQDPRQRQLFKNIVYVGALAILLGIEPEVVEKLFGEQYKGKEKLLASNV
QALHLGCDFARENLELLGLRVRRADRVGERIFVDGNSAAALGCVYGGATVAAWYPITPSS
SVAEAFQKYCAKFRVDPATGQHRFAIVQAEDELASIGMVVGAGWNGARAFTATSGPGISL
MAEFIGLAYFAEIPVTLINVQRGGPSTGMPTRTQQADILACAYASHGDTKHVLLFPEDPH
ECFEHAAAALDLADRLQTPVFLMTDLDIGMNQRLCAPFAWDDSQAYDRGKLMSAEELEAG
RDFGRYKDVDGDGIPWRTLPGTHPSKGSYFTRGTTRDAYARYSERGPDYIYNMERLLKKF
ATAATLVPQPVLRPAAQKTELGVIYFGSTSPSMHEALQALEERGIHLDALRLRAFPFPQS
VVQFLAQHRQVFVVEQNRDAQMRSLLVNELDVDPARLVRVLHFDGTPITARFIVQAISTH
VQKTQASGTKESA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattccacaaattgaggcggtcaacgatttcgtcatcaagttcgccaacgtc
aacggctcgggatcggcctcggccaacgagctgttcgccaaggccatcctgcgcatgggc
gtgccggtgagcccgcgcaacatcttcccgagcaacatccagggcctgccgacctggtac
gaggtgcgcgtgaccgaagacggccacctgggccggcgcggcggcaccgacatgatggtg
gcgatgaacccgcagacctgggacgccgacgtggccgaactcgagcccggcggctacctg
ttctacgacagcacgcggccgctgccgccctcgaagttccgcagcgacgtccgcgtgatc
ggcatgccgctgaccgagatctgcaacgccgtctaccaggacccgcggcagcgccagctg
ttcaagaacatcgtctacgtgggcgcgctggccatcctgctgggcatcgagcccgaggtg
gtcgagaagctgttcggcgagcagtacaagggcaaggaaaagctgctcgcctccaacgtg
caggcgctgcacctgggctgcgacttcgcgcgcgagaacctcgagctgctgggcctcagg
gtgcggcgcgccgaccgggtgggcgagcgcatcttcgtggacggcaacagcgccgcggcg
ctgggctgcgtgtatggcggcgccacggtggcggcctggtatccgatcacgccgtcgtcc
tcggtggccgaggccttccagaaatattgcgccaaattccgcgtggacccggccaccggg
cagcaccgctttgccatcgtgcaggcggaggacgagctggcttccatcggcatggtggtc
ggcgcgggctggaacggcgcacgcgccttcacggcgacctcgggccccggcatctcgctg
atggccgagttcatcggcctggcctactttgccgagatcccggtcacgctcatcaacgtg
cagcgcggcggcccatcgacgggcatgccgacgcgcacgcagcaggccgacatcctggcc
tgcgcctacgcctcgcacggcgacaccaagcacgtgctgctgtttccggaagacccgcac
gaatgcttcgagcatgcggcggcggcgctggacctggccgaccggctgcagacgccggtg
ttcctgatgacggacctggacatcggcatgaaccagcgcctgtgcgcgccctttgcctgg
gacgacagccaggcctacgaccgcggcaagctcatgagcgccgaggaactcgaggccggc
cgcgacttcggccgctacaaggacgtggacggcgacggcatcccctggcgtacgctgccg
ggcacgcacccgagcaagggcagctacttcacccgcggcaccacgcgcgatgcctatgcc
cgatattcggagcgcgggccggactacatctacaacatggagcggctgctgaagaagttt
gcgaccgcggccacgctggtgccgcagccggtgctgcgcccggctgcccagaagaccgag
ctgggcgtgatctatttcggttcgaccagcccgtcgatgcacgaggcgctgcaggcactg
gaagaacgcggcatccacctggacgcgctgcggctgcgcgcctttccgtttccgcagagc
gtggtgcagtttctcgcgcagcaccggcaggtgttcgtggtcgagcagaaccgcgacgcg
cagatgcgcagcctgctggtcaacgagctggacgtcgatcccgcccggctggtgcgggtg
ctgcatttcgacggcacgcccatcacggcgcgcttcatcgtccaggccatcagcacgcat
gtgcagaagacgcaagcctccggcacgaaggaatctgcatga
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