Vigna angularis (adzuki bean): 108326075
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Entry
108326075 CDS
T04660
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108326075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108326075
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108326075
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108326075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF2635
Motif
Other DBs
NCBI-GeneID:
108326075
NCBI-ProteinID:
XP_017414824
UniProt:
A0A8T0KUN0
LinkDB
All DBs
Position
2:complement(3424659..3443152)
Genome browser
AA seq
1646 aa
AA seq
DB search
MVLYTESATNSVKAVAFSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDD
KSLCKSCGQASKLCPGHFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRKEVDMR
TTQLELIMKGDIIRAKSLDSINLDEFTHSGDGDESHHCSAEQQGENWTSLQFSEAMSILK
KFLKRQYKKCQNCGVVNPKISKPTFGWFHMNVLSADAARANTIRVVESEINNDDMSLGGG
ETTDEEDISSVGAVKRDKRKKGNLSHKLAAQNKLSGSLLPSQVKGILELLWENEARLCSY
ISDIQDQGFGKKAGHSMFFLENIFVPPIKFRPPAKAGDDVMEHPQTVLLTKVLQGNISLG
EAHINKLDPSKVLSRWMDLQQSINLLFDSKTASGQRDVAAGICQLLEKKEGIFRQKMMGK
RVNFACRSVISPDPYLAVNEIGIPPYFAIRLSYPERVTPWNAMKLRNAILNGPDSHPGAT
HYSDKQATVKLQRSPKLLAMISRKLPSSRGVILDQGKISDQEFEGKVVYRHLKDGDVVLV
NRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYN
IVNANNQYVKPTSGDPIRALIQDHIVSASLLTKKDTFITYEEFNQLLYSSGVSMAGVGSF
SGKHGQKVFMTNSECEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTVEKNAKIP
SNFFKTQVREGERYTRDKSRDKDLPDEDKLLIYKNNLVRGVVDKAQFGDYGIIHTVQEFY
GSNVAGNLLSALSRLFTSFLQMHGFTCGVDDLMIIEEKDVERMNQLSSCEEIGDIVHREF
IGVMNGDNIDTTTMQLNIEKKVRSNGEAALTYLDRKMISNLNSRTSSGILKELLSEGILK
PSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRA
GGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTV
RDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRQLDRSSPYINKLPDAL
KGKAENFFRDSLKQRNLGLKRRDLLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTL
NTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMTCPLRPNKSMEDAICLADKLKKIT
VADIIKSMKVSVVQVTVHAGQVCSIYKLVMKLYKPKQYPKYTDITLEDWEDTLRVFFVRE
LEDAIESHMALLSKISGIKKFKTDPQSNYSNSSEDGHGNESESETKGKNKDDDDDDGVVE
DTEGYEDLGSDAQKRKRQGTDEVDYEDGPEEEMHDGEQSEETENDEDGSDVDVNENDNDM
TLDANNSQGLEKSSKFKPIVEKNSLKREKKKSKAITKKYDRAVFVKAKGMHFEIHFKFTG
EPHILLAQIAQRTAKKVCIQNFGRVGECKAITCKESGVIYYGEDGRNRDDIPASMKEKIP
ALQTSGIHFKTFWELQDDLDVRYIYSNSVHAMLSAYGVEAARETIIREVQNVFKSYGISV
NIRHLTLIADFMTHSGGYSPMNRTGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLET
PSSRICLGLPVKVGTGCHDLIQKLEI
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctacaccgagagtgcgacgaattccgttaaggcggtggcgttcagtttttta
acgagcgacgacttgcagcggagtagtctagtgaagataacgaatccgattttgctaaat
gctttgcttcaccctgtgcctggtggactatacgatccagctatgggtccgctggatgac
aagtccctttgtaagtcatgtggtcaagcttctaaactttgcccaggtcattttggtcat
attgaacttgtttctcctgtctacaatcctttgatgttcaatattcttagcagtattata
cagagaacttgtttctcttgctatcattttcaagctagcagaaaagaggtggatatgcgt
actacccaattggagctcataatgaaaggggatattatcagggccaaaagtttagactct
attaatttagatgaattcacacactcaggtgatggtgatgagagccaccattgtagtgcc
gagcaacagggagaaaattggacctcccttcaatttagtgaggcaatgtctattctaaag
aagtttctgaagcgacaatataaaaagtgtcaaaattgtggagttgtaaatcctaaaatc
agtaaaccaacctttggatggtttcacatgaatgtcctttctgctgatgcggctagagca
aataccatcagagttgtggaaagtgaaataaacaatgatgacatgtctttaggtggtggg
gagactacagatgaagaagatatatcatctgttggggctgttaaaagagataaaagaaaa
aaggggaatttgtctcacaagctagctgcacaaaataaactttctgggtcgttgctacca
tcacaggttaaaggtattttagagcttttgtgggaaaacgaggccagactctgctcttat
atcagtgatattcaagatcaggggtttggaaagaaagctggtcactcaatgttctttcta
gagaatatttttgttccaccaatcaaattccgacccccagctaaagcaggtgatgatgtg
atggaacatcctcaaactgttttactgactaaggttttacaaggcaacatatccttagga
gaggcccatataaataagttagatccctctaaggtgctaagccggtggatggatctgcag
caatctattaacttgctattcgacagtaaaactgcttctggccagagagatgtggctgct
ggcatttgtcaattgctagagaagaaagaaggcatctttcgccagaaaatgatgggaaag
agggttaattttgcatgccgttctgtcatatcaccagatccttatttggcagtcaatgaa
attgggatacccccatattttgcaataagattatcctatcctgagagagtgactccttgg
aatgccatgaagttaagaaatgctatccttaatggccctgactcccatcctggtgctaca
cactattctgataaacaagcaacagtcaagcttcaacgaagtccgaagttgcttgctatg
atatcaagaaagttaccttcatcaagaggagttattttggatcaagggaagatttctgat
caggaatttgaagggaaagttgtgtatcgccacttgaaggatggtgatgttgtgcttgtc
aatagacagccaacactccataaacctagtataatggcgcatatagttcgtgttctgaag
ggggaaaaaactgtacggatgcactatgcaaattgcagtacttataatgctgattttgat
ggcgatgagattaatgtacattttccacaagatgaaatttctcgggctgaagcttacaat
attgtaaatgctaacaatcaatatgtgaaacctacaagtggggatccaatcagagcttta
attcaggatcatattgtgagtgcttctcttcttaccaaaaaggatactttcataacttat
gaagagttcaatcaattactctatagttctggtgtatctatggctggggtaggctccttc
tctggcaaacacgggcagaaagttttcatgacaaattctgagtgtgaaatgtttttgttt
cctccagcaatatggaagcctgaacccctatggacaggaaaacaggttatcagtgcattg
ctatactatatcaccagaggttcaccaccatttacggttgagaagaatgcaaaaatccca
tcaaattttttcaaaactcaggtcagggagggtgaaagatatacacgtgataagtcaaga
gacaaggatttgcctgatgaggataaattattgatatataaaaataatttggtgcgaggt
gtggttgataaggctcaatttggtgactatggtataatacatacagtgcaagaattttat
ggatcgaatgttgctggtaacctactctcagcattaagtcggttgtttacttccttttta
cagatgcatgggttcacatgtggagtagatgatcttatgataatagaagaaaaggatgtt
gaaagaatgaatcaactaagcagttgtgaggaaattggtgacattgttcatcgggaattc
attggagtaatgaatggtgataatatagatacaaccacaatgcagttgaatattgagaaa
aaggtacgcagtaatggagaagcagccttaacatacttggataggaaaatgataagcaat
cttaactcaagaacaagctcaggaatattaaaggagctactatctgaaggaatattgaaa
ccttcaggaaaaaattgtatttctcttatgactacatctggagctaagggtagtatggtg
aatttccagcagatatcttctcatctaggtcagcaagagttggaaggaaaacgagtccca
cgcatggtttctggaaagaccttgccctgctttgctccctgggattgttcccctagagca
ggagggttcattattgaccggtttcttacaggccttcatccgcaggagtactactttcat
tgcatggcgggtcgtgaggggttagttgatactgctgtcaaaacatctcgcagtgggtac
ctgcaaagatgcttgatgaaaaacctcgagtgccttaaagtatgttatgatcatactgtc
cgagatgctgatggttcgattattcagtttcactatggagaagatggtgttgacgtccat
cagactagctttatcaacaaatttgaagcgttgtcaactaataaagaattggtttatagc
aactgttgccgtcagctagacagatcaagtccatatattaacaaattgcccgatgctctc
aaaggaaaagcagagaatttctttcgtgactccttaaaacagagaaatcttggtttgaaa
cgacgagacctcttaaagttgatggagcataagtatgtctcttgtcttgctcaaccaggt
gaatcggttggtgtattagcttctcagtctgttggcgaacctgcaacacagatgactttg
aatactttccaccttgctggtcgaggtgaaatgaacgtgacacttggaattccacgtttg
caagaaattgtcatggctgcttcacgtgatatcaaaactccgtttatgacatgccccttg
agaccgaataaatctatggaagatgctatttgtcttgccgacaaattgaagaaaatcact
gtagctgacataattaagagtatgaaggtttctgttgtacaagtaacagttcatgccggt
caggtttgcagtatatataaacttgtgatgaagctatataaacctaaacagtatccaaaa
tacactgatattacccttgaagattgggaggacactttgagagttttctttgtgagagag
ttggaggatgctattgaaagtcacatggcactgctttctaaaattagtggcataaaaaaa
ttcaagacagatccacaatcaaattattcaaacagctcagaagatggtcatggcaatgaa
tcagaatcagagacaaaaggtaaaaataaggatgatgatgatgatgatggtgttgttgaa
gacactgaggggtatgaagatcttggatcagatgcgcaaaagagaaaacggcaaggtact
gatgaggttgattatgaggatggtccggaagaggaaatgcatgatggtgagcagtcagag
gaaactgaaaatgacgaggatggcagtgatgtggacgttaatgagaatgataatgacatg
acacttgatgctaataattctcaaggacttgaaaaatcatccaagttcaagcccattgtt
gaaaaaaatagtttgaaacgggaaaagaaaaaatctaaagcaataacaaaaaaatatgac
agggcagtttttgtgaaagctaaagggatgcatttcgagatccactttaaatttaccggt
gaacctcatattttgttagcgcagattgctcagagaacagccaagaaggtttgcattcaa
aattttggaagggttggtgaatgtaaagctattacatgtaaagaaagtggagtaatatac
tatggtgaagatggcaggaatagggatgatattcctgcctcgatgaaagaaaaaatacca
gcattgcagacatcagggatacattttaaaacattctgggagttgcaagatgatcttgat
gttaggtatatttattcaaacagcgttcatgctatgctaagtgcttatggggtggaagca
gccagggagaccatcattagggaagtacaaaatgttttcaaatcttatgggatatcagta
aatatccggcacttgacactcattgctgactttatgacgcactctggtggctatagtcct
atgaacagaacggggagcatagcagactgcacatcccctttcatcaaaatgtgctttgag
acagcttccaaatttattgttgaggcagcttatcatgggcaggtggacaacttggagaca
ccatcttcccgaatttgtcttggtttgcctgtgaaggtgggaactgggtgccatgatttg
atacagaagcttgagatatga
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integrated database retrieval system
