Vigna angularis (adzuki bean): 108338587
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Entry
108338587 CDS
T04660
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108338587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108338587
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108338587
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
108338587
FA (Fanconi anemia) pathway
Downstream FA components
108338587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Pex19
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
108338587
NCBI-ProteinID:
XP_017431039
LinkDB
All DBs
Position
7:38019551..38035329
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AA seq
1238 aa
AA seq
DB search
MVSASNPNPKTKNVYHIGGLEVEFPYQPYGSQFAFMGRVISTLNQARREGHCHALLESPT
GTGKSLSLLCSSLAWQQHYKSKQDPLNPLPEATTDPLAYGGGFVVEELSLSSASENPDRT
QTEANNKKQKKKKAPTIYYASRTHSQISQVVNELRKTAYRVPMAVLASRKHYCTNKNIIG
KENINEECKLLLKDGATGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDLVKVGQLVKGCSY
YAARSMSDDAQLVFCPYNYIINPVIRAAMDVDIKGAIVILDEAHNIEDIARDAGSVDIEE
DVLDKLQMELQQLCSINTAIYQPLYEMAQGLTSWMERKKNQLEKRDFHHYVSHWTGDNAL
RELEEANISKQCFPILLECATKAIKVATDLETDEPHISGTAVITLEGLFSSLTYFFSRNG
SHMLDYQLALQRRVRKDTGRATGNWTCAFSLWCLNPAVVFRDVADLSLSIILTSGTLSPL
ASFTSELGVHFETSLEAPHVIDVDSQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGKS
LEEIFKIVPGGCLVFFPSYKLMDKLRNRWSETGQWSRLNAEKPLFVEPRGGSQDDFELVL
KGYYDSIHHEEGPVRGRKRRIKKIDLNHVHAVDSLQNSRKGGAALLGVCRGKVSEGIDFS
DANARVVIIVGIPFPNINDIQVGLKKKYNDTYKSFKSLLSGNEWYCHQAFRALNQAAGRC
IRHKFDYGAIILLDERFQEERNRAFISKWIRRPLKVYDSFDLSLEGLKSFFENAKEHYGI
NTVHATQSLDINGDVQKKDQNACSTRKNNQKLNKSDNGDGRETTMIENSISSPTLTSQDL
VECEPSAQKNSSTYSCQYLPQYFTKTDPRFTAIMHEETYVVKETPCIDVDYGPSSPHYSK
DDNSGSFIIEAPAQIPGHESSLSMSLNTGSKNSSRAQSSITVTPKRSVITNDIPEMESVN
SYHHKRMRPTVTPYINLEENFIAPCASPSLTRSRKSSVVVREIIQASEYDFERVLKSNSP
PLLISNIPGSCSPTAPPLDQRLLIFCSLCKSPLGRPENHLYLRCSMISSSKVHLRSLLKQ
RLRTCTTDTSKSIPVLITDSLFVDQRICNRIPKSAPEHGIWCPEDGCVFSTIFCPFCSNV
SNLLGVQIMATDSSNVQLLDKILFYFDSLEVKSSEESGSTDSGNGDLLPVNDSGEDKTTV
LNSIEKYSYLPRPGNAEVWKTGKSKQRLRGLRCAANQS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgcatcaaaccctaaccctaaaactaaaaatgtttaccacatcggtggtctg
gaagtagaatttccttaccaaccatatgggtctcagtttgcctttatgggtagagtgatc
tctaccctcaaccaggctcggagagaaggccactgtcacgcgttgctcgagtctccaact
ggcaccggcaagtccctttcgcttctctgttcatctctcgcttggcagcaacactataaa
tctaaacaagaccccctcaatcccctcccggaggcaaccaccgatcctctggcttatggc
ggcggatttgttgtcgaggagctttcactatcttctgcatcagaaaacccggaccgtacg
caaactgaggcaaacaacaagaagcagaagaaaaagaaagcaccaactatttattacgct
tcgagaacgcactcacagatttctcaagtggttaacgaattgcgcaaaactgcatacagg
gtgccaatggctgtgttggcgtcgcggaaacattactgcacaaataaaaatataattggc
aaagagaatatcaatgaagaatgtaaactattattgaaagatggggcaacagggtgtcca
gaattcaaaaatgctcataaagtcaaaggtcatccatcccttcagaaaggaggatgcaat
gaggtgcatgacatagaagatctagtaaaagttggacaattggtcaaagggtgctcttat
tatgctgctcgttctatgtcagatgatgcacagttggtattttgtccttataactatatc
attaatccagtcatccgggcagcaatggatgtggatatcaaaggcgccatagtgattctt
gatgaagctcacaatatagaggacattgctcgtgatgctggaagtgtggatattgaagag
gatgttttggataaactacaaatggaactccagcaactttgttcaattaatactgcaatt
taccaaccactatatgaaatggcacagggccttactagttggatggaaaggaagaaaaac
cagctcgaaaaacgtgattttcaccactatgtatcgcattggactggtgataatgcttta
cgagagcttgaagaagcaaatatttcgaagcagtgcttccctatcttgttggaatgtgct
accaaggcaatcaaagttgctacagacttggagacagatgaaccgcatataagtggcacg
gcagtgataacattggaaggcttattctcgtcgctaacttatttcttctcaagaaatgga
tctcacatgttggattaccagcttgctcttcagcgacgtgttagaaaagatactggaaga
gctactggaaactggacatgcgcttttagtttatggtgtttgaatccagcagttgtgttt
agagatgttgctgatctttctttatcaattatcttgacttcaggaacactgtcaccgttg
gcatcctttacttctgagcttggagttcattttgaaactagtctagaagctcctcatgta
attgatgttgactcacaggtgtggcctgctgtaatctccactggtcctggcaattatcct
ttgaatgcaagttataaaactgcagatggatatgcattccaggatgcagttggaaaatct
ttagaggaaatcttcaagattgttccaggcggatgccttgtgttctttccaagttataaa
ttgatggacaaattacgcaaccgttggtctgaaacaggtcaatggtctcgactaaatgca
gaaaagcctctttttgtcgaaccaagaggcggaagccaagatgattttgaactggtatta
aaggggtattatgattcaattcatcacgaagaaggaccagtgcggggaaggaaaagaagg
attaagaaaatagatctaaatcatgtgcatgcagttgattccctacagaattctagaaaa
ggaggagcagctttacttggtgtttgtcgaggaaaggtttctgaaggaattgatttctcc
gatgctaatgctagagtagttattattgttggtattccatttccaaatataaatgatatt
caagttggattgaagaagaaatataatgacacctacaaatcattcaaaagtctattgagt
ggaaatgagtggtactgccaccaagcattccgagctttaaatcaagctgcagggcgctgt
atacgtcataaatttgattatggagcaattatcctattggatgaacgttttcaagaagaa
agaaatagggcatttatttcaaagtggataagaagaccgttgaaagtatatgacagcttt
gatttgtcattggagggattaaagtctttctttgagaatgctaaggaacactatggcata
aatacagtgcatgccacacagagtttggatataaatggggatgtccaaaagaaggatcag
aatgcatgttccacaagaaaaaataatcagaagctgaacaagtctgataatggagatggg
agggaaacaacaatgatcgagaatagcatttcttcacccaccctaacctctcaagatctt
gttgagtgtgagccatcagctcaaaagaatagtagcacttatagttgtcaatatctccca
cagtactttacaaagacagatccaaggttcactgcaatcatgcacgaggaaacttacgtt
gtaaaggaaaccccttgtatagacgttgactatggtcccagtagccctcattactccaaa
gatgacaactctggttccttcataattgaggcccccgctcaaattccaggtcacgagtca
agtctttcaatgtctttgaatactggaagcaaaaattcttcaagggctcagtcttcaatt
acagttactcctaaaaggagtgtaattacaaatgatattccagaaatggaaagtgttaat
tcttaccatcataaaaggatgaggcccacagtcactccttatataaaccttgaagaaaac
tttattgcaccttgtgccagtccttctcttacacggtccagaaagagctctgtagttgtt
agagagataattcaggcaagtgaatatgattttgagagggttttgaagtcaaattctcct
ccattactgataagcaatatacccggttcatgttcaccaactgcccctccgctagaccaa
agattattgatattttgttcactctgcaaaagtccattaggccgacctgagaaccatcta
tatcttaggtgctcgatgatttcatcatcaaaagttcatctaagatcccttttgaaacag
aggctgagaacttgcactactgatacttcaaagagtattccagttctcattactgattct
ttatttgttgatcaacgaatttgcaatagaatacccaaaagcgcaccagaacacggtatt
tggtgtccagaagatgggtgtgttttcagcaccattttctgccccttttgcagtaatgtc
agcaatttgctaggagttcagatcatggctaccgactcatcaaatgttcagttacttgac
aagatattgttttactttgattcattggaagttaagagcagtgaggaatcagggagcact
gattcaggaaacggggatctgttgccggttaatgactctggtgaggataaaactactgtc
ttaaattctattgaaaaatattcttatcttccccgaccagggaatgcagaagtttggaag
actgggaaatcaaagcaaagactaagaggcttgcgctgtgcagcaaaccaaagctga
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