Victivallales bacterium CCUG 44730: C5Q97_08910
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Entry
C5Q97_08910 CDS
T05502
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vbc
Victivallales bacterium CCUG 44730
Pathway
vbc00540
Lipopolysaccharide biosynthesis
vbc01100
Metabolic pathways
vbc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C5Q97_08910 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vbc01005
]
C5Q97_08910 (rfaD)
Enzymes [BR:
vbc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C5Q97_08910 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vbc01005
]
Core region
C5Q97_08910 (rfaD)
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Gene cluster
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
AVM44823
UniProt:
A0A2S0KUU6
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All DBs
Position
complement(2167179..2168168)
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AA seq
329 aa
AA seq
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MYIVTGGAGLIGSAVVWGLNRRGIEDILVVDHLGNSDKWKNLSALSFSDYMEKEAFRSRL
AAGGFNGARIEGVIHMGACSSTMERDASYLIDNNYHATKELAEYCLARNIRFLYASSCAT
YGDGSRGYVDDESRIEELRPMNMYGYSKQLFDLWAKRHGALASITGCKFSNVYGPNERHK
GDMRSVVLRAFEQISASGKLKLFRSYRPEYADGEQMRDFLYVKDAVDMVLFLFEHPQGAG
IYNIGSGRAETWNALAAAAFEALGKPVDIEYIDMPENLRDRYQYYTKAEMNKLRALGYGR
EATSLRDSVIDYIRNYLVPGRYLGDECER
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcgtaacgggaggcgccggcctgatcggcagcgccgtcgtctggggcctgaac
cggcgcggcatcgaagacatcctggtggtggaccacctcgggaattcggacaaatggaag
aatctctcggcgctctccttctccgactatatggagaaggaagcgttccgctcccggctt
gccgccggcggtttcaacggcgcccgcatcgagggcgtgattcatatgggggcctgttcc
tcgaccatggagcgggatgcgtcatacctgatcgacaacaattaccatgcgacgaaagag
ctggccgaatactgccttgcccggaacatccgttttctctatgcgtcgagctgtgcgacc
tacggcgacggcagccgcggctacgttgacgacgagtcgcggatcgaggagctgcggccg
atgaacatgtacggctactcgaagcagcttttcgacctctgggcgaagcggcacggcgcg
cttgcgtcgatcaccggctgcaaattctcgaatgtctacgggccgaacgagcggcacaag
ggggatatgcgcagtgtcgtgctgcgtgcgttcgagcagatttcggcgagcggaaagctg
aagctgttccgttcctaccgccccgaatatgccgacggcgagcagatgcgcgacttcctt
tatgtgaaggatgcggtggatatggtcctcttcctcttcgagcatccgcagggagccgga
atctacaacatcggcagcggccgggccgaaacctggaacgcgcttgccgccgccgccttc
gaagcgctcggcaagccggtcgacatcgagtatatcgatatgccggagaatctgcgcgac
cgttaccagtactatacgaaagccgagatgaacaaactcagggcgctcggctacgggcgc
gaggcgacgagcctgcgcgactcggtgatcgattatatccgcaactatctggttcccggc
cggtatctgggcgacgaatgcgaaaggtga
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