Variovorax boronicumulans: CKY39_01850
Help
Entry
CKY39_01850 CDS
T05068
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00907
Pinene, camphor and geraniol degradation
vbo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CKY39_01850
Enzymes [BR:
vbo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
CKY39_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
DUF3182
LpxI_N
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
ATA52106
UniProt:
A0A250DCP9
LinkDB
All DBs
Position
complement(397259..399208)
Genome browser
AA seq
649 aa
AA seq
DB search
MSSFQKILIANRGEIAVRVMRTARAMGYRTVAVYSRADADAEHVRQADEAVCIGEPLPAQ
SYLNIESIVAAARASGADAVHPGYGFLAENAAFAQACRDAGLVFIGPSPEAIVAMGDKAG
AKRLMQAAGVPCIPGYQGDDQSTATLAAEAERIGWPVMIKATAGGGGRGMRLVASAGAFA
EQLQSAQSEALHAFGDATVILERAIVAPRHIEIQVFADRHGHAIHLGERDCSVQRRHQKV
IEEAPSPAVDAALRARMGATAVAAAKAIAYEGAGTLEFLLDAQGQYWFMEMNTRLQVEHP
VTEAVTGLDLVELQLRVAAGEPLPLTQDDVRITGHAIEVRLCAEDPQQGFLPQSGTLTAW
RPSPALRTEHALRDGAEVPPFYDSMIAKLIASGRTRDEARQRLLAGLRDTVALGLPTNQA
LLQRALAHPVFASGGATTAFIGDHLDALLATDTASDTRAALLAALLLQTGARGWPSPLAH
TLPNALRFALDGAVHTARVTPRGAAHFGVVLDDTAPATLALLALPDDGPVRFACNGVAAQ
AWVVRRGERTDVHFDGRAHRLDDLTHVAVPRAGAGGGDGLLRASMNGRVVALLAAEGDTV
AAGQPLVTLEAMKMEHVHCAPRAGRVAALHVAVGTQVAARHIVAEIAEA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttttcaaaaaatcctgatcgccaaccgcggcgaaatcgccgtgcgcgtgatg
cgcaccgcgcgcgccatgggctaccgcacggtcgccgtgtactcccgcgccgatgcagac
gcggagcacgtgcgccaggccgacgaggccgtgtgcatcggcgagccgttgcccgcgcag
agctacctgaacatcgaatcgatcgttgccgcggcccgtgccagcggcgccgacgcggtg
cacccgggctacggcttccttgccgagaacgcggccttcgcgcaggcctgccgcgacgcg
gggctggtcttcatcggaccatcgcccgaagccatcgtcgcgatgggcgacaaggccggc
gccaagcggctcatgcaggcggccggcgtgccgtgcattcccggctaccagggcgacgat
caaagcaccgccacgctggccgccgaggccgaacgcatcggctggcccgtgatgatcaag
gccacggccggcggcggcgggcgcggcatgcggctcgtggcctcggccggcgccttcgcc
gagcaattgcagagcgcgcagtccgaggcgctgcatgccttcggcgacgccaccgtgatc
ctggagcgcgccatcgtcgcgccgcgccacatcgagatccaggtgtttgccgaccgccac
ggtcacgcgatccacctcggcgagcgcgactgctcggtgcagcggcgtcaccagaaggtg
atcgaggaagcaccctcgccggccgtcgatgccgcactgcgcgcacgcatgggcgccacc
gccgtggccgccgcgaaagccatcgcctacgaaggcgcgggcacgctcgagttcctgctc
gacgcgcagggccagtactggttcatggagatgaacacgcggctgcaggtggagcatccg
gtgaccgaagcggtgacggggctggacctcgtcgagctgcagctgcgcgtggcggccggc
gagccgctgccgctgacgcaggacgacgtgcgcatcaccggccatgcgatcgaagtgcgc
ctgtgcgccgaagacccgcagcagggcttcctgccgcaaagcggcacgctcacggcgtgg
cgtccgtcgcccgcgctgcgcaccgaacacgcgctgcgcgacggcgccgaagtgccgccc
ttctacgactcgatgatcgccaagctcatcgcatcgggccgcacgcgcgacgaagcacgg
cagcggctgctggccggcctgcgcgacacggtggcgctcggcctgccgaccaaccaggcg
ctgctgcagcgcgcgctcgcgcaccccgtgttcgcaagcggcggagcgaccaccgccttc
atcggcgaccacctcgatgcgctgctggccaccgacaccgcgagcgacacacgcgccgcc
ctgctcgcggccctgctgctgcagaccggcgcgcgcggctggccctcgccgctggcgcac
acgctgcccaatgccttgcgctttgcgctcgacggcgccgtgcacacggcgcgcgtgaca
ccgcgcggcgcagcgcacttcggggtcgtgctggacgacacggcaccggccacgctcgcg
ctgctggcgctgccggacgacgggccggtgcgcttcgcctgcaacggcgtggccgcgcag
gcatgggtggtgcggcgcggcgaacgcacggatgtccacttcgacggccgcgcccaccgc
ctcgacgacctcacgcacgtggccgttccgcgcgccggcgcgggcggcggcgacggcctg
ctgcgcgcgtcgatgaacggccgcgtggtcgcgctgctcgccgccgagggcgacaccgtc
gccgcaggccagccactggtcacgctcgaagccatgaagatggaacacgtgcactgcgca
ccgcgcgcgggccgcgtcgcggcgctgcatgtggccgtgggcacgcaggtggccgcgcgc
cacatcgtggccgagatcgccgaggcctga
DBGET
integrated database retrieval system
