Variovorax boronicumulans: CKY39_11795
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Entry
CKY39_11795 CDS
T05068
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00053
Ascorbate and aldarate metabolism
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CKY39_11795 (garD)
Enzymes [BR:
vbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CKY39_11795 (garD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
ATA53825
UniProt:
A0A250DHI4
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All DBs
Position
complement(2601371..2602942)
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AA seq
523 aa
AA seq
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MADANTRPPLYIRIHAADNVAIVANDGGLKAGTAFDDGLVLVDTVPQGHKVALVDLAEGD
AIRRYNVVIGYALKALPRGSWVHERVMRMPVAPELDGLPIATVKPPALPPLQGYTFEGYR
NADGSVGTRNILAITQTVQCVAGVTEFAVQRIKAELLPKYPHVDDVVALEHSYGCGVAID
APDAIVPIRTLRNISLNPNFGGEVMIVSLGCEKLQPERLLPPGTIPITDQRGAPAEDLDV
VCLQDDAHVGFMSMIDSVMRQAEAHLARLNQRRRETVPASELVVGVQCGGSDAFSGVTAN
PAVGFCTDLLVRAGATVMFSEVTEVRDGIDQLTSRASTPEVADAMIREMAWYDAYLDKGR
VDRSANTTPGNKKGGLSNIVEKAMGSIVKSGSAPITGVLAPGEKLAQKGLIYAATPASDF
ICGTLQLAAGMNLHVFTTGRGTPYGLAEVPVIKVATRSDLARRWHDLMDVNAGRIADGEA
SIEDIGWEMFRLMLDVASGRKKTWAEHWKLHNALVLFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcgaacacccgaccgccgctgtacatccgcatccacgcggccgacaacgtg
gccatcgtcgcgaacgacggcggcctgaaggccggcacggccttcgacgacggcctggtg
ctggtcgacaccgtgccccagggccacaaggtggcgctcgtcgacctggccgaaggcgac
gccatccgccgctacaacgtggtgattggctacgcgctcaaggcactcccgcgcggcagc
tgggtgcacgagcgcgtgatgcgcatgccggtcgcgcccgagctcgacggcctgcccatc
gccacggtcaagccccctgccctgccgccgctccagggctacaccttcgagggctaccgc
aacgccgacggctcggtgggcacgcgcaacatcctcgcgatcacgcagaccgtgcagtgc
gtggcgggcgtgaccgagttcgccgtgcagcgcatcaaggccgagctgctgccgaagtac
ccgcatgtggacgacgtggtggcgctcgaacacagctacggctgcggcgtcgccatcgac
gcgcccgacgccatcgtgccgatccgcaccctgcgcaacatcagcctcaacccgaacttc
ggcggcgaggtgatgatcgtgagcctgggctgcgagaagctgcagcccgagcgcctgctg
ccgcccggcaccatcccgatcaccgaccagcgcggcgcgcccgccgaagatctcgacgtg
gtctgcctgcaggacgacgcgcacgtcggcttcatgtcgatgatcgattcggtgatgcgc
caggccgaggcgcacctcgcgcggctgaaccagcgccggcgcgagaccgtgcccgcgagc
gagctcgtcgtgggcgtgcagtgcggcggcagcgacgccttctcgggcgtcaccgccaac
ccggccgtgggcttttgcaccgacctgctggtgcgcgcgggcgccaccgtgatgttctcg
gaagtcaccgaggtgcgcgacggcatcgaccagctcacctcgcgcgcatccacgcccgag
gtggccgacgccatgatccgcgagatggcctggtacgacgcctacctcgacaagggccgc
gtcgaccgcagcgccaacaccacgccgggcaacaagaagggcgggctgtcgaacatcgtc
gagaaggcgatgggctcgatcgtcaagtcgggctcggcgccgatcaccggcgtgctcgcg
cccggcgagaagctggcgcagaaaggcctgatctacgccgccacgccggccagcgacttc
atctgcggcacgctgcaactggcggccggcatgaacctgcacgtattcaccaccggccgc
ggcacgccctacgggctggccgaggtgccggtgatcaaggtcgccacacgcagcgacctc
gcgcgccgctggcacgacctgatggacgtgaacgcgggccgcatcgccgacggcgaggcc
agcatcgaggacatcggctgggagatgttccgcctgatgctcgacgtggccagcggccgc
aagaagacctgggccgagcactggaagctgcacaacgcgctggtgctgttcaacccggca
ccggtcacctga
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