Variovorax boronicumulans: CKY39_13835
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Entry
CKY39_13835 CDS
T05068
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00362
Benzoate degradation
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CKY39_13835 (pcaB)
Enzymes [BR:
vbo01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
CKY39_13835 (pcaB)
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GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
ATA54181
UniProt:
A0A250DJ66
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Position
3008489..3009703
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AA seq
404 aa
AA seq
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MSIFEGFLSTSETLGAFSDRAFVDAMLRFEAALARAQAAEGLIPESAAHSIVGSCKVELF
DVAKIVRESGRAGSVAIPLVKALREAVGLFNAEAVPFVHFGSTSQDVIDSAMALVTREAV
ALVEADLAKAADALLRLAVQHADTPMLARTLMQPASVTSFGFKCAGWAAPLVRSRTRLRA
AAKHALQLQLGGAVGTLAQMKGQGAAVRQRMAKELGLGDPGATWHTQRDEWVALGCELGL
LTGSLGKVAVDISLLGQYEVAEVAEPSEPGRGGSSAMPHKRNPVASMVAIAAAHRAPQRV
AALLGAMPQQHERALGAWQAELAEWPQLLMSAHGSVRAMAGALPGLQVDAARMRANIDRL
RAELPRDAADEWFDPALAVNAGQTALAQVKALQAQLSSDKELSP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttttgaaggcttcctttccacctccgaaacgctgggcgccttcagcgaccgc
gccttcgtcgacgccatgctgcgcttcgaggctgcgctcgcgcgcgcgcaggcggccgag
gggctgattcccgagagcgccgcgcattcgatcgtcggcagctgcaaggtcgagctgttc
gacgtggccaagatcgtgcgcgagagcggacgcgccggcagcgtcgccatcccgctggtg
aaggcgctgcgcgaagcggtgggcctgttcaatgccgaggccgtgcccttcgtgcacttc
ggcagcaccagccaggacgtgatcgacagcgcgatggcgctggtcacgcgcgaagccgtc
gcactggtcgaagccgacctcgccaaggccgccgacgcgctgctgcgcctggcggtgcag
cacgccgacacgccgatgctcgcgcgcacgctgatgcagccggcctcggtcaccagcttc
ggcttcaagtgcgccggctgggccgcgccgctggtgcgcagccgcacccgcctgcgcgcc
gccgcgaagcacgcgctgcagctgcagctcggcggcgccgtcggcacgctggcgcagatg
aaggggcagggcgccgcggtgcgccagcgcatggccaaggaactcggcctgggcgacccc
ggcgccacatggcacacgcagcgcgacgaatgggtcgcgctcggttgcgaactcggcctg
ctcacgggcagcctgggcaaggtcgcggtcgacatttcgctgctcggccagtacgaagtg
gccgaggtcgccgagcccagcgaacccgggcgcggcggctcgtcggcgatgccgcacaag
cgcaaccccgtggcctcgatggtcgccatcgccgccgcgcaccgcgcgccgcagcgcgtg
gccgccttgctcggcgccatgccacagcagcacgagcgcgcgctcggcgcctggcaggcc
gagctggccgaatggccgcagctgttgatgtcggcgcacggcagcgtgcgcgccatggcc
ggcgccttgcccggcctgcaggtcgacgccgcgcgcatgcgcgccaacatcgaccggctg
cgcgccgagctgccgcgcgacgcggccgacgaatggttcgaccccgcgctggccgtgaac
gccggccagaccgcactggcgcaggtgaaagccctgcaagcccaactctcatccgacaag
gaactctcgccatga
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