Verrucomicrobia bacterium S94: EGM51_13960
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Entry
EGM51_13960 CDS
T05990
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs00020
Citrate cycle (TCA cycle)
vbs00640
Propanoate metabolism
vbs00660
C5-Branched dibasic acid metabolism
vbs01100
Metabolic pathways
vbs01110
Biosynthesis of secondary metabolites
vbs01120
Microbial metabolism in diverse environments
vbs01200
Carbon metabolism
Module
vbs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vbs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGM51_13960 (sucD)
00640 Propanoate metabolism
EGM51_13960 (sucD)
00660 C5-Branched dibasic acid metabolism
EGM51_13960 (sucD)
Enzymes [BR:
vbs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EGM51_13960 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBG48446
UniProt:
A0A4P6PJZ5
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All DBs
Position
complement(3186853..3187731)
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AA seq
292 aa
AA seq
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MAILVDKDSKIIVQGITGSEGSFHAGQCLEYGNNVVGGVTPGKGGRTALDGRVPVFNTCA
EARKATGADVSLIFVPPPFAADAIMEAAASGIELIVCITEGIPVAQMVEVKAFVEKTGSR
FIGPNCPGILTPEGAKVGIMPGFIARKGTVGVISKSGTLTYEAVDQLVQQGLGQSTCIGI
GGDPIIGTTMKDLLEMFENDPETEAIVMIGEIGGSMEIEAAQYAKEHVSKPVVGFIAGQT
APPGRRMGHAGAIVSGADESAAAKKKLMAECGIRVVESPADIGRMVKEALIN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttagtagataaagattcaaagatcatcgtgcagggcatcaccgggtcggaa
ggttcgtttcatgcggggcaatgtcttgaatacggaaataacgtggtcggcggtgtaacg
ccgggaaaaggcggccggaccgcactcgacggtagggttccggttttcaatacctgtgcg
gaggcgcggaaagcaaccggtgcagatgtttccctgatttttgttccgccgccgttcgcg
gcggatgcgattatggaagctgccgcatccggtattgagctgattgtctgtattaccgaa
ggtattccggtggctcagatggttgaggtgaaggcgtttgtggaaaaaaccgggtcccgt
ttcattggtccgaactgcccggggattctgactcccgaaggggccaaggtcggcatcatg
cccggttttattgcccggaagggaacggtgggcgtgatttcaaagtccggcacgctgaca
tatgaggcggtggatcagctggttcagcaggggctggggcagtccacctgcatcgggatc
ggcggcgatccgatcattggaacaaccatgaaggatctgctcgaaatgtttgagaacgat
ccggaaaccgaggccattgtgatgattggggaaatcggcggatcgatggaaattgaagcg
gcgcagtatgcgaaagagcatgtttccaagccggtcgttgggtttattgccggccagacg
gcaccgcccggccgccggatggggcacgccggcgctattgtttccggtgcggatgaatcg
gcggcggctaagaagaagttgatggccgaatgcggaatccgtgtggtagaatcgcccgcc
gacatcggccgtatggtgaaagaggccctgataaattaa
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