Venturia canescens: 122416843
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Entry
122416843 CDS
T09386
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
vcan
Venturia canescens
Pathway
vcan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122416843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122416843
Enzymes [BR:
vcan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122416843
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122416843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Rpr2
Motif
Other DBs
NCBI-GeneID:
122416843
NCBI-ProteinID:
XP_043285852
EnsemblRapid:
LOC122416843
LinkDB
All DBs
Position
10:8005695..8020602
Genome browser
AA seq
1384 aa
AA seq
DB search
MVKEQYRETDVARKISHVSFGVDSRHNMERQAHIHVVAKNLYSQDSQHTPVQFGVLDKRM
GTCSNASPCGTCGKSLSECIGHYGYIDLELPVFHVGYFRSVIGILQTICKKCSHVMLPPI
EKKAFLTRVLNPNLGYLSRKALRKRILEKAKKTTTCQNCREINGTVKKAGLLKIVHEKYK
AKKKTDPIVLEKLAEYNNVMEENKELDSILQSGLIHVLNPLEVQGILERIPTPDIPLLLM
NPNCALPKDLILTRIPVPPICIRPSVISDLKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYINSEMSGIPPNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIHVAKILTYPERVNPSNIELMRSLIRNGPEVHPGANF
VQQGKTQFKKFLRYGNRQKIAQDLQYGDVVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKSQACQLASCLLVGADAGMCIDLPPPAILKPALLWTGKQI
FSLILRPNNSCHIKANLKTKGKAYSRDEELCFNDSFVVIRNSELIAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARIASYFLMNRGFSIGIGDVTPGQGLLRAKHELLDAGY
TKCKEYIRQQEEGRLVLQPGCSEEETLETMILKELSVIRDHAGKACLKELHPSNSPLVMA
LSGSKGSFINISQMIACVGQQAISGHRVPNGFEDRALPHFDRHSKIPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIVQIL
YGGDALDPTYMEGKDCPVDYKRVLDHVRAKSPYKEEEPLDGQDVVKATTELLNGDEYSCL
SDEFKQELATFLKTISRKITRLRQNISTKSRVGMQLERLTVSQLVEFIHTCKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANPKISTPIITA
ALENDTDAEFARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRINLLKLEVDAN
SIRYSICTSKLKLNPKLVTVRGDSIITVNPSKLKHSLNYALTQLKELVPNVVIKGLPTVA
RAVIHNDDTSGSTRYKVFVEGDNMREVMATPGVLGCKTTSNNTIEVFKTLGIEAARSTIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTADHL
FDAAYYGQRDAICGVSESIIMGIPVPVGTGIFKLLHKSDKDKPQERRLIFDDPQFHKTPP
STRS
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggaacagtacagagaaactgacgttgcacgaaaaatctctcatgtttcgttt
ggcgttgacagtcgtcacaacatggagcgacaggctcatatccatgttgtggcaaaaaat
ttatatagtcaggatagtcagcatacaccggtccagtttggtgttcttgacaaacgcatg
ggaacctgttccaatgcaagtccttgtgggacatgtgggaaatctctgagcgagtgcatt
ggtcattacggttacatagacctagagttaccagtttttcatgttggatatttccggtca
gtgattggaattttgcaaacaatttgcaagaaatgttcacatgtaatgcttccaccgatc
gagaaaaaagccttcctaactcgtgtactgaatccgaacttgggatatttgagtagaaaa
gcgctgagaaagcgaattcttgaaaaagccaaaaagacaacaacctgtcaaaactgccgt
gagatcaatgggactgtgaaaaaagctggcttactcaaaatcgtacatgaaaaatacaaa
gccaagaaaaaaactgatcctattgtactagaaaaattagcagagtacaataatgttatg
gaagagaacaaagaattggatagtattttgcaaagtggattgatccatgttcttaatcca
cttgaggttcaaggaattttggaacgtattccaactccggacattccacttttgctgatg
aatcccaattgtgctttgccgaaagatctgattttaacgagaattcctgtaccgccaatt
tgcatcaggccaagcgtaatttcggatttgaaagcaggcactaacgaggacaatctaacg
atgaaactttcggaaattgttttcataaacgatgttattcaaaagcatagacaaagcggg
gcaaaagtacaaatgtacaacgaggattgggaatttttgcagttgcattgcgctctctac
ataaacagcgaaatgtccggtattccgccaaatatgcaacccaaaaagtcgggtcgcggt
ttggtgcaacgtttgaagggtaaacaaggtcgttttcgtggtaatttgtcaggaaagcgt
gtagatttttccagtagaacagttatatcgccggatccaaatctaagaatcgaacaagtg
ggagtgccgatccacgtagcaaaaattctcacttatccggaacgagttaatccatcaaac
atagaattgatgagaagtctgattcgaaacgggccggaagttcatccgggagcgaatttc
gtccagcagggaaaaacacaatttaagaagtttttgcgttacggaaatcgacagaaaatt
gctcaagatttgcagtacggggacgtagtcgaacgtcacttgagagatgacgacgtggtc
ctgtttaatcgtcagccgtctcttcacaaattaagtatcatggcgcacaaagcaaaagtt
ctcgagcatcgaacatttcgtttcaatgagtgcgtttgtacaccatataatgccgatttc
gacggtgacgagatgaacttgcatctaccacaaacggaagaagctcgtgccgaggcgttg
gttctcatggggaacaaatcgaatttggtaacgccgagaaatggcgagcttttgatcgct
gctactcaagactttattaccggtggttatcttctaacgcaaaaggatacgtttctcaat
aaatcgcaggcatgccaattagccagttgtttattggtaggcgcagatgcaggaatgtgc
attgacctgccaccaccagccattttgaagcccgcactactgtggacaggaaaacagata
ttcagtttgatattgcgtccgaataatagttgccacataaaggcaaacttaaaaactaaa
ggaaaggcatattcacgcgacgaagagttatgtttcaacgactcttttgtggttatacga
aactctgagttgattgctggttcgatggataaatcgacgttgggctcaggctcgaaacaa
aatattttttacgtgctgctccgagattggggcgaggatgcgtctacaacagccatgtgg
cgtttagcaagaatagcgagctacttcctgatgaatcgcggattttccatcggaatcggt
gacgtaacacctggtcagggacttttacgtgccaagcacgaactcctcgatgctggatac
acgaaatgtaaggaatacataagacaacaagaggaaggacgattggtcctccaaccggga
tgttcagaagaggaaaccctagaaactatgatacttaaagagttgtcggtaattcgtgac
cacgccggtaaagcttgcctcaaagaacttcatcctagcaacagtcctctcgtaatggcc
ctttccggaagcaaaggaagttttatcaatatatcgcagatgattgcttgcgtgggtcaa
caagccataagcggtcatcgtgtgcctaatggttttgaggatcgcgcgttaccgcatttc
gatcgacactcgaaaatcccggcagctaagggtttcgttgagaattccttttattcgggg
ctcacgccaaccgaattttttttccataccatgggtggtcgcgagggtttagttgacaca
gcggtcaaaacggcggagactggttacatgcagcgacgattagttaaaagtttggaggat
ttgtgtttgcattatgatatgacagtgaggaattcggtgggtgatattgtgcaaattttg
tatggtggtgatgccttggatccgacttacatggaaggcaaagattgtcccgtcgattat
aaacgagttttggatcacgtgcgcgcaaaatctccttacaaagaggaagaaccgttggat
ggccaggacgttgtgaaagcgacaacggaattgttgaacggtgatgaatattcatgtctg
agcgacgaattcaaacaagaattagcgacatttttgaaaacaatatcccggaaaataacg
cggttgcgacagaacatttcgacaaaatcgcgggtaggaatgcaactggagcgtttaacg
gtgtcacaattagtggaatttattcacacctgcaaggaaaaatacatgagagctaaaata
gagccggggacagcggtcggtgcattagcagctcaaagtatcggtgaacctggtacgcag
atgactctgaaaacctttcattttgctggtgtcgcctcgatgaatatcactcaaggtgta
ccgagaattaaagaaattataaacgccaatccgaaaataagtactcccatcatcaccgca
gcactggagaatgatacggacgctgaattcgctcgtcgggtaaagggacgaatagaaaaa
acgacgttgggcgaagttacggaatatatcgaggaagtttatttgccggacgactgtttc
ctgctcataaaactcgatgtggataggataaacttgctgaaacttgaagtagatgctaat
tcgattcgatattccatatgcacgtctaaattgaagctgaatccaaaacttgtgactgta
cgaggagactcgataattacggtgaatccgagtaaacttaaacacagtttaaattatgcg
ctgacgcaactgaaggaattggtgccaaacgttgttataaagggtttaccgacagttgct
cgtgccgttatacacaacgatgacacaagtggaagtacgcgatataaagttttcgtcgag
ggtgataacatgcgtgaagtcatggcgacccccggagtcctcggttgcaaaactacctcg
aacaacaccatcgaggttttcaaaacattaggaattgaagcggcgcggtcgacaattatg
acagagatcaagttagtaatggagaatcacggaatgagcatagatcgaaggcatccgatg
ttggtggctgatctgatgacgagcaggggcgaagtcctcggcataacacgtcaagggctt
gcaaaaatgaaggaatctgtgcttaacctcgcttcgtttgaaaaaacagccgatcatctt
tttgacgcggcttactacggacaaagggatgcgatatgtggagtatctgagtccataatt
atgggcatcccggtacctgttggaactgggattttcaagcttcttcacaaatccgacaag
gacaaacctcaagaacgacgactgattttcgatgatccacaatttcacaaaacaccacca
agcacaagaagctaa
DBGET
integrated database retrieval system
