Varibaculum cambriense: CYK25_003175
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Entry
CYK25_003175 CDS
T09090
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00900
Terpenoid backbone biosynthesis
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CYK25_003175
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vcb01006
]
CYK25_003175
Enzymes [BR:
vcb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CYK25_003175
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CYK25_003175
2.5.1.29 geranylgeranyl diphosphate synthase
CYK25_003175
Prenyltransferases [BR:
vcb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CYK25_003175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WIK89200
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All DBs
Position
complement(703711..704781)
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AA seq
356 aa
AA seq
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MPSAPEFSPQIDELLPQAWQAGVSRWQELEGIAELFEVGLAALKGGKRTRARLAYTGWKA
ITAGNDTPPKPVLDLGVALEIYQASALVHDDIIDNSPLRRGKDAAHISFAKRHLAEQRRG
DHQEYGRLAAILLGDLLLAVADQCAFEVAATANDPDAFFANWTEMTREVAAGQYLDLRLE
TDELDPAHAREQILTVIRHKSGRYSVAHPLTLGARLAGASPEQLKTLFTIGEYWGIAFQL
CDDELGVFGDPSQTGKPAGGDLTEGKKTVLWSLAEQLLGEDARANLHQVFGNRAASEDQI
LAVTDALHSQGVRDQHRQLITEYAAKGDALVASGEFGNAGREALLRLGRALVERES
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgccccagagttttcccctcaaatcgatgaactattaccgcaggcatggcaa
gccggggtatcccgctggcaagagctagagggaatagcagagttatttgaagtaggtctg
gcagctcttaaaggtggaaaacgtacccgggcgcgcctggcctacaccggttggaaagcg
ataactgccggcaatgataccccaccaaaacccgtgcttgacctgggagtagccctggag
atttaccaggccagcgccctcgtccatgacgacattattgataactctcccctgcgccgc
ggtaaagatgccgcccacatcagtttcgcgaaaaggcatttagcggagcaacgccgcggg
gatcaccaagagtatggacggctagcggcaatcctcttaggagatctactgctcgcagtg
gccgaccagtgcgctttcgaggtcgccgccaccgccaatgatccggacgcattcttcgct
aactggacggaaatgacccgcgaggttgccgccggacagtatctggatctacgtctcgaa
actgatgagcttgaccccgcccatgcgcgcgaacagattttaacggttattcgtcacaag
tccggacgctactcggtcgcccacccgctcactctcggagcccgcctagccggagctagc
cccgagcagctaaaaaccctcttcacgatcggggaatattggggaatcgcttttcaactt
tgcgacgatgaactcggcgtttttggcgatcccagccaaaccggtaaacctgcaggtggc
gatctaaccgaagggaaaaagacggtcctgtggtccctagcggaacagctcctgggcgag
gatgcgcgcgccaacttgcatcaggttttcggtaaccgcgccgccagtgaagaccaaatt
ttggcagtcactgacgccctacatagccaaggggtcagagaccagcaccgccagctaatc
accgaatatgccgctaaaggtgacgccctggtagctagtggcgagtttggtaatgcgggt
cgcgaggctctgctacggctgggacgcgccctagtggaacgggaatcctag
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