Varibaculum cambriense: CYK25_004105
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Entry
CYK25_004105 CDS
T09090
Name
(GenBank) isoprenyl transferase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00900
Terpenoid backbone biosynthesis
vcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CYK25_004105
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vcb01006
]
CYK25_004105
Enzymes [BR:
vcb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
CYK25_004105
Prenyltransferases [BR:
vcb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CYK25_004105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-ProteinID:
WIK89357
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All DBs
Position
complement(887605..888369)
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AA seq
254 aa
AA seq
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MTHLTDLVYRLYARNLEKALPTESLPRHVGVILDGNRRWAHQVGAQSETGHRVGADKALE
FLGWSEEVGIPVVTLWMLSTDNLRRSGEELSKLFDIICTVVEQIASLDRWHLRLLGNLSL
LPDQVQQRLQRAVDQTRTDSPLTVNIAVGYGGREEITEAVRNLLLEKAQEGATLETVAQE
LSVDEITSHVYTAGQPDPDLVIRTSGEQRLSGFLMWQSTHSEYYFCEAFWPDFRKIDFYR
ALRDFALRERRMGK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaccttacagatctggtctatcgactctatgcccgcaacctagaaaaggcgctg
cctactgaatctttgccgcgccacgtgggggtaatcctggatgggaatcggcgctgggcg
caccaggtgggggcgcaatctgaaactggccatagagttggtgctgacaaggctctcgaa
tttttagggtggagtgaagaggtcgggattccggtagttaccctctggatgctctctacc
gataatctgcgtcgctccggagaagaactcagcaagctctttgacattatttgcaccgtt
gtagaacaaatagcttcccttgaccgctggcatttgcggttgttagggaatctttctctc
ctgccggatcaggtacaacagcgtctacaacgggcggtagatcaaacgcgtaccgactct
cccctaaccgtaaacattgcggtcggatatggaggacgcgaagaaattaccgaagccgtg
cgcaacttgttactggaaaaggcacaggagggcgctactttagaaaccgtagctcaagaa
ctatccgtagatgaaataacttcccacgtctataccgccggccagcctgacccggattta
gttattcgtacctcgggtgaacaacggttatctggattcttgatgtggcagtccactcac
tccgaatactatttttgcgaagccttctggcccgatttccgcaaaatcgacttctaccgc
gcactgcgcgactttgccctgcgagaaaggcgaatgggtaagtaa
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