Vanessa cardui (painted lady): 124533349
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Entry
124533349 CDS
T09161
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124533349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124533349
Enzymes [BR:
vcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124533349
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124533349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124533349
NCBI-ProteinID:
XP_046964528
EnsemblRapid:
ENSVCAG00000010439
LinkDB
All DBs
Position
11:complement(8038569..8044803)
Genome browser
AA seq
1133 aa
AA seq
DB search
MGEINKHPEWDTAKGLREPIKTLEDKWKLVPSFLQIKGLVKQHIDSFNYFINVEIKKIVQ
ANEKVFCDSDPLFYIKYLNAYVGTPDLEEGFNVTKPTTPHECRLRDMTYSAPITVDIEYI
RGNQRVIKNKQLIGRMPLMLRSSNCVLTNKSDFELSQLNECPHDPGGYFIIRGQEKVILI
QEQLSRNRMIVDEFKGAIQCQVTSSTHEKKTRTNVIVKNGKYVLRHNALSDDIPIAIAFK
AMGICSDQEIMQLVGTDDAIVKKMAPCIMDCHNLKIFTQNQALSYIGSKLKVKRFQTPNA
KFRTPVDEARDLLATTILAHVAVENYNFYVKAIYLAIMVKRVIEAENSKAAIDDPDYYGN
KRLELAGSLLALMFEDLFKRFNWELKSIADKIIPKVKAAPFDVVKHMRPDLIANGLFTAI
SSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGML
CPSDTPEGEACGLVKNLALMTHITTECSEEPISRLACNAGVEDVKLLGGEEINHPAVYMV
FLNGNILGVTRQYKKLIKIFRMFRRRGLISAFVSIYPNHNQRTVYICSDGGRLCRPYIIV
EKGYPLVQQSHINELNRGIRKFQDFLSDGLIEYLDVNEENDSHIATVEAEIDPYVTTHLE
VEPFTILGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQKNRIDTLMYNLVYPQCP
MVKTRTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNRASIDRGYGRCLVYKSAKTI
MKRYSNQTSDRILGPSRDANTGKVIKAHEILDTDGIAAPGEMVENRQVLINKQMPPATLN
PISQGQPQQIDYKDVPVTYKGPVESYIEKVMVSSNSEDAFLIKILLRQTRVPEIGDKFSS
RHGQKGVTGLIVQQEDMPFNDRGICPDMIMNPHGFPSRMTVGKTIELLAGKAGLMEGKFH
YGTAFGGSKVRDVCGELEKHGYNYHGKDIFYSGLTGEPLEAYIYSGPVYYQKLKHMVQDK
MHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLASDAFSADI
CGACGRLASRAWCHACRSSAAVSAVEMPYACKLLFQELAAMNIVPKLTLKKYC
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaataaataaacatcccgaatgggatactgcaaaaggcctaagagagccgata
aagacactagaggacaaatggaaacttgttccatcatttcttcaaattaaggggttggtt
aaacagcatattgattcattcaattatttcattaatgtcgaaattaagaaaatcgtccaa
gcaaatgagaaagtgttctgtgattcagatcctttgttctacattaaatatttgaatgcc
tatgttggaacacctgacttagaagaaggattcaatgtaactaagcccactactcctcat
gagtgtaggcttagagacatgacatattcagctccaattacagttgatattgaatacatt
agagggaatcaaagggtcattaaaaataaacagttaattgggaggatgccattgatgtta
cggtcttctaattgtgttttaacaaacaaatcagattttgaattatcacagttgaacgag
tgtccccatgatcctggtggttacttcattattagaggacaagagaaagttattttaatt
caagaacaactgtctcggaaccgaatgatcgtggatgagtttaaaggagcaattcagtgt
caagttacaagttcgactcatgaaaaaaaaactagaacaaatgttattgtgaaaaatgga
aaatatgtcctgagacataatgccttgtcggatgatataccaatagcaatagcttttaaa
gctatgggtatttgtagtgatcaagaaataatgcaacttgtgggtacggatgatgcaatt
gtaaagaaaatggctccatgtataatggactgtcacaatttgaagatttttactcaaaac
caagctctgtcttacattggcagtaaacttaaagtgaaacgatttcaaactcccaatgct
aagttcagaactcctgtcgatgaagctagagaccttttagcaacaacaatacttgctcat
gtggctgtagaaaattacaatttctatgtaaaagctatttacttggcaattatggtaaaa
agagttattgaagcagagaacagtaaagctgctattgatgatccagattactatggcaat
aaaagacttgagttagccgggtcattactggctcttatgtttgaagatttattcaaaaga
ttcaactgggaattaaagtccattgcagacaaaattatacccaaagtaaaagcagcacca
tttgatgtggtaaaacatatgaggccagatttaattgctaatggcctctttacagctata
tctagtggaaattggactatcaagagatttaaaatggaaagacatggagtcacacaggtt
ctaagtcgactcagttatatttcagctttgggtatgatgacaagagttaattcacagttt
gagaaaaccagaaaagtttccgggccacgatccctacaaccatcacaatggggcatgctg
tgtccatcagatactcctgaaggggaagcatgtggccttgttaagaatctggcacttatg
acacatataacaacagagtgttctgaggaacctatatcaaggttggcttgtaatgctggt
gtggaggatgtaaaactactaggaggtgaagaaattaatcatccagcagtttatatggta
tttcttaacggtaatatattgggtgtaactagacaatacaaaaagcttataaaaattttt
agaatgtttcgacgccgcggcttaatatcagcttttgtatccatttacccaaatcataat
caaagaacagtttatatatgcagtgacgggggtagactgtgccggccatatattatagta
gaaaaaggatatccgctagtccagcaatctcatataaacgaactcaacagaggaattagg
aagttccaagactttctctcagatggtcttatcgaatacttagatgtgaatgaagagaat
gacagccacattgcaaccgttgaagcagagattgatccctatgtcactactcatctggaa
gttgaaccttttacaattttgggtgtctgtgctggccttgtaccctatccccatcacaac
cagagtcctagaaacacctaccagtgtgctatgggaaaacaagctatgggcacaattggt
tataatcagaaaaatagaattgacacattgatgtacaatttagtttatccgcaatgtccc
atggtaaaaactagaacaatagaattaactaacttcgacaaattaccggccggccagaac
gcgaccgtagcagtaatgagttacagtggctatgatatagaagacgctttaattttaaac
agagcttctatcgaccgcggttatggtcggtgtctggtttataaaagtgcaaaaacaata
atgaaacgttacagtaatcaaacatcggatagaatcctaggtccatctagagatgccaat
acagggaaagttataaaagcgcacgaaatattagatactgatggtattgctgctccagga
gaaatggtcgaaaatcgtcaagtattgatcaataaacaaatgcctccagctaccttaaat
ccgatcagtcaaggtcaaccgcaacaaatagactataaagatgttccagtcacatataag
ggcccagtcgaatcttacatcgaaaaagtaatggtgtcatcaaactcggaagatgcgttt
cttattaaaatattactaagacaaactagagtgccagagataggtgataaattcagttcc
cgtcatggacaaaagggagtaaccgggttaatcgtacaacaagaagatatgccttttaac
gaccgcggaatatgtccagatatgattatgaatccccacggatttccgtctcgaatgacc
gttggcaaaactattgaacttttagcagggaaagctggattgatggagggaaagtttcat
tacggtacggctttcggtggatctaaagtccgagacgtctgcggcgagttagagaagcac
ggttacaattaccacgggaaggatatattttactcgggtttgacaggggagccgctggag
gcgtacatatactccgggcccgtgtactaccagaagctgaagcacatggtgcaggacaag
atgcacgcgcgcgcacgcggcccgcgcgccgtgctcacgcgccagcccaccgagggccgc
tcgcgcgacggcggcctgcgcctcggcgagatggagcgcgactgcctcatcggctacggg
gccagcatgctgctaatggagcgcctgatgctggcgtcggacgcgttcagcgcggacatc
tgcggcgcgtgcgggcgcctggccagccgcgcgtggtgccacgcgtgccgctcctccgcc
gccgtgtccgccgtggagatgccctacgcctgcaagctgctcttccaggagctagccgcc
atgaacatcgtgcctaaactaactcttaagaagtactgttag
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