Vanessa cardui (painted lady): 124538536
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Entry
124538536 CDS
T09161
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124538536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124538536
Enzymes [BR:
vcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124538536
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124538536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124538536
NCBI-ProteinID:
XP_046971579
EnsemblRapid:
ENSVCAG00000015230
LinkDB
All DBs
Position
20:complement(859130..881957)
Genome browser
AA seq
1397 aa
AA seq
DB search
MPKEQYRETYVGRKISHVTFNVDSASAIQQAAHIQVITKNLYAQDTQRVPASYGVLDRRM
GTNQKDANCETCGLGLAECVGHYGYIDLALPVFHVGYFRSIITILQTICKNCAKVMLQEP
LKKSFRRKFTHPELSYLHKKNLRAAVLKKAKTCTKCPHCDSLNGIVKKSPAGILKIIHDK
YRNKKVSDPMVQRVLRDFNEAKETNKELATMINSGLIIELSPLEVINLFRRIPDEDIPLL
GMDVKTSRPEDLILTRLPVPPLCIRPSVASDIKAGTNEDDLTMKQSEILLINDVISRHVA
SGGKSELVQEDWDYLQLHVALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRKLVCNGPDVHPGA
NYVQQRGVNHKKYLKYGNREKIAQELKCGDTVERHLVDGDVVLFNRQPSLHKLSIMCHRA
RVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDTFFTKAEAQQLASCLLAGPDSTMRIDMPPPAILKPRKLWTGK
QIFSLIMKPNHRCEVKANLETKGKNYTGNKDMCVQDSYVIIRNSELICGSMDKSTLGSGT
KTSIFYILLRDWGEEFAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAKNKLLES
GYSKCDGYILEMEKGTLQSQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATGEVVQ
FRYGSDGLDPSYMEARDRPVDLARALQHVRARCRSSDEEPLDGDGIVVAAEETLALDDFK
TCPDEFKAELLNFLKTIANKVRLLRARYSACGAVARQLERLTLTQLVQFIRVCHDKYQRS
IIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRVISTPII
TAELMEPLDQEFARRVKGRIEKTTLGEITTYIDEVYLPHECFLLVRLDAERIRLLCLEVN
VHSIVYSICTSKLKVKPGNVQAVSEWAIKVYAEASKHGGWLNMAMQQLARQLPSVVVKGL
PRVSRAVIACDDTGSITRYKLCVEGDGLRDVIATYGVEGRKTTSNNILEVYHTLGIEAAA
STIMSEIEAVMAGHGMAVDRRHVALLAAQMCARGEVLGITRYGLARMKESVLNLASFEKT
SDHLFDAAYYGQRDRIEGVSECIILGVPAGIGTGVLQLLHAHGPAHAHGPAHAHAHAHGP
TPTLLFDNPDYHPSIWD
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggagcaatatcgagaaacatacgtcggcagaaagatctcccatgttacattt
aacgtggacagtgcctcagccattcaacaggcggcgcacatccaagtcattaccaagaat
ttgtatgctcaggacacacagagggtaccagccagctatggagtacttgatcgacgaatg
ggaacaaatcaaaaagatgctaactgtgaaacctgcggtcttggcttagccgagtgtgtg
gggcattatggctacatcgatttagccttgcctgtcttccatgttggctactttcgatct
ataatcacaatacttcaaacaatatgcaagaattgcgcgaaagtaatgctacaggagccg
ttaaaaaaatccttccgtcgaaagttcacacatccggaactgtcatacttacataagaaa
aacctccgagcagcggttcttaagaaggcgaagacatgcaccaagtgtcctcactgtgat
tccctgaacggtatcgtcaagaagagcccggccggtattttgaagattatccatgacaaa
tacaggaataagaaagtttcggatcctatggtccagagagtgctgagggatttcaacgag
gcaaaggaaacaaacaaggagctggctacaatgattaatagtggactgattattgagctt
agtccactagaggtgattaacttattccgccgtattcccgatgaagatatcccgctcctg
ggtatggatgttaagacttccagaccagaagatttgatattaacacgcctacctgttccg
ccgctctgtatccgaccgagtgtcgcttcggacattaaagctggcactaacgaggatgat
ctgacgatgaagcaatcagaaatcttgctcattaatgacgtaatatcccgtcacgtggcc
agcggcggcaagagcgagctcgtgcaggaggactgggactacttacagctgcacgtggcg
ctctatatcaacagcgaaatgtctggcataccactttctatgcagccgaagaaaccaggt
cgaggtttggtgcagcgcttgaaaggcaagcagggccggttccgcgggaacttgtccggg
aagcgggtagacttctccagccgaactgtcatctcgcccgaccccaaccttcagatccaa
gaggtcggtgttccggtacacgtagccaagatcctcacttacccggagcgggtgtttccc
gcgaatctgcagtggctccggaagctggtgtgcaacgggcccgacgtgcaccccggggcg
aactacgtgcagcaacgaggagtcaaccacaagaagtacctcaagtacggcaacagggag
aaaatcgcgcaggagttgaagtgcggcgacacggtggagcggcacctggtggacggcgac
gtggtgctgttcaaccgccagccgtcgctgcacaagctgtccatcatgtgccaccgcgcg
cgcgtgcagccgcagcgcaccttccggtttaatgagtgcgtgtgtacaccctacaacgca
gatttcgatggtgacgaaatgaatatgcatttgccgcagactgaggaggcgagggctgag
gcgcttatactcatggggaacaaatctaatctcgtcacacctcgaaatggagaactcctg
atcgcagcgacccaggacttcatcaccggcgggtacctgatcacccagcgggacacgttc
ttcacgaaagccgaagcgcagcagctcgcgagctgcctgctggccgggcccgacagcacc
atgaggatcgacatgccgccaccagctattctcaagccgaggaagctttggactgggaaa
caaatatttagtttgataatgaagccgaaccatcgctgcgaagtgaaggcgaacctggag
acgaagggcaagaactacaccggcaacaaggacatgtgcgtgcaggactcgtatgtgata
ataaggaactctgagctgatctgcgggtccatggacaagagtaccctgggctccggcacc
aagaccagcattttctacatcctgctgcgcgactggggggaagagtttgcggtgcgcggc
atgtggaggttagcacgaatggcgtcatactacatgatgaacagaggcttcagtttcggt
atcatagacgtgactcccggcaagaaacttatcgaggctaagaataagctgctggaatct
gggtattccaagtgtgacggctatatcctggagatggagaagggcacgttgcaatcacag
ccgggctgcacgatggaggagaccctggaagctgtgatgctcagcgagctgagtagcata
agagagttggcggccaaggcgtgtttccgtgaactgcaccccaccaacgctcctcttata
atggctcagagtggatcaaagggatcgaatatcaacatatcgcagatgatcgcctgcgtc
ggccagcaggcgctcaacggcaagcgcgtgcccaacggcttcgaagacaggtcgctgccg
cacttcgagaggcattcaaagattccggcggcgagaggattcgtcgagaacagcttctat
tccgggctgacgcccacggagttcttctttcacacgatgggaggtcgcgaggggctcgtg
gacaccgccgtcaagaccgcggagacgggctacctgcagaggagactcgtcaagtcgctg
gaagacctggtgctgcactatgacatgacggtgcgcaacgcgacgggcgaggtggtgcag
ttccgctacggcagcgacgggctggaccccagctacatggaggcgcgcgaccggcccgtc
gacctggcgcgcgcgctgcagcacgtgcgcgcgcgctgccgctccagtgatgaggaacca
ctcgatggtgacgggatcgtagtggccgctgaggagaccctcgcgctggacgacttcaag
acctgccctgatgagttcaaagctgagttgttaaacttcctgaaaacgatagcgaacaag
gtccggctgttgcgcgcgaggtactcggcgtgcggcgccgtggcgcgccagctcgagcgc
ctcacgctgacgcagctcgtgcagttcatccgcgtgtgccacgacaagtaccagcgcagc
atcatcgagcccggcaccgccgtcggcgcgctcgccgcgcagagtataggggagccgggt
acccagatgacgctgaagacgttccactttgccggcgtggcgtccatgaacatcacgcag
ggcgtgccgcgcgtcaaggagatcatcaacgcgtcgcgcgtcatctccacgcccatcatc
accgccgagctgatggagccgctcgaccaggagttcgccaggcgcgtcaagggccgcatc
gagaagaccaccttgggggaaatcacgacgtacatagacgaggtgtacctgccgcacgaa
tgcttcctgctcgtccggctcgacgccgagcgcatccggctgctgtgtctcgaagttaac
gtccactccattgtgtattcgatatgcacatcaaagttgaaagtaaaaccaggaaatgtg
caagccgtctccgagtgggccatcaaagtgtacgcagaggcgagcaagcacggcggctgg
ttgaatatggccatgcagcagctcgcccggcagctgccctccgtcgtcgtcaagggcctg
cccagggtctcgcgagcggtcatcgcctgtgacgacacgggatccatcaccaggtataag
ctgtgcgtagaaggagacggactgagagacgtcatcgcgacgtacggcgtcgagggcagg
aagacgacctccaacaatatcttagaggtgtaccacacgctgggcatcgaggcggcggcg
tcgaccatcatgagcgagatcgaagcggtgatggcgggccacggcatggcggtggaccgg
cgccacgtggcgctgctggccgcgcagatgtgcgcgcgcggggaggtgctcggcatcacg
cgctacggcctcgcgcgcatgaaggagtccgtgctcaacctggccagcttcgagaagacg
tcggaccacctgttcgacgcggcgtactacgggcagcgcgaccgcatcgagggcgtgtcg
gagtgcatcatcctgggcgtgccggccggcatcggcacgggcgtgctgcagctgctgcac
gcgcacgggcccgcgcacgcgcacgggcccgcgcacgcgcacgcgcacgcgcacgggccc
acgcccacgctgctcttcgacaaccccgactaccacccctccatatgggactag
DBGET
integrated database retrieval system
