Vibrio cholerae O1 El Tor FJ147: IR04_15680
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Entry
IR04_15680 CDS
T03827
Symbol
mnmC
Name
(GenBank) FAD-dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcf03016
]
IR04_15680 (mnmC)
Enzymes [BR:
vcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
IR04_15680 (mnmC)
Transfer RNA biogenesis [BR:
vcf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
IR04_15680 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_3
Pyr_redox_2
FAD_binding_2
FAD_binding_3
3HCDH_N
Pyr_redox
Glyco_transf_4
GIDA
Motif
Other DBs
NCBI-ProteinID:
AKA00543
LinkDB
All DBs
Position
I:2350783..2352798
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AA seq
671 aa
AA seq
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MSSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVI
AETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQ
FAQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAP
SKNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAG
SLSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQ
GASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEK
ATDKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLL
EQQGKLTAHYQTPIDALTWQPETQLWQLRSGDTLMSHQCVVIASGHQFDSLSQTAELPLG
KVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHE
NAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLAQQH
QAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVRK
LRKGKALTQKV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatttcacacgcccagcttggctggaacgacgcaggaacccccgtctctgat
caatttgacgatgtttatttctctaacgtcaatggtctggctgagacgcgctatgtgttc
cttgagcagaatcatctcccacaaagatggcacaacgatgaccaaagacgatttgtgatt
gcagaaactggcttcggtactggcctgaattttctggcggtgtggcaagcgtttgtcgcg
tttcgtgaagccaatcccgatgccaaactcaaagagctgcatttcatcagttttgaaaaa
tacccgctcagtaaaagcgatttaattcaagcgcatcaagcgtggccggaactggcgcaa
ttcgcgcaaaaactgcacaagcactacccgttagccattccagagtgtcagcggattgtg
ttgaatgatggactcgtcacgctcgatctctggtttggggatatcaaagactgcctgccg
aaagtcgcaacacaagagcaaggcttagtggatgcatggttcctcgatggttttgctccc
agcaaaaaccccgagatgtggaatcaaaacctgtttgcaggtatggcaaaactggcgaaa
catggctgtacctgcgccacctttacttcggctggctttgtccgccgcggcttgattgac
gcgggttttgcgatgaaaaaggtcaaaggctttggcactaagcgtgaaatgatcgccggc
agcctgagtgaaaaagtaccttacaccaatatcgcacccgaatttcgttttgaggccact
cacggcctacaagaggtggccatcatcggcggtggtatcgccagtgccacgctagcgaca
accttagccagacgcggtgttgccgtcacgctttactgcgccgatgagaaaccggcgcaa
ggtgcatccggtaaccgacaaggcgcggtctatccgctactcagtggcgatcacaacgcg
gtttcacgagtgtttgcgcctgcctttctgtttgcccgccaatggattgaacaagcggcg
gagcagataaactttgaccacgattggtgcggcgtgactcaattaatgtgggatgaaaaa
gccacggacaaactcaagagcatgcttgaggggaatttcccaacacaattagtgcatggt
ttatccgcagagcaaaccaatcaacaagtcggcgtgccagtggataaagccagtgtgcat
tatccgctcggaggctggctcagccctgcggagctgactcaaggcttaatccatctttta
gagcagcagggcaagctcactgcgcattatcagactccgattgatgcattgacttggcag
ccagagactcaactgtggcaactgcgcagtggcgacacactcatgtcacatcagtgtgtg
gtgattgccagtggccatcaatttgacagcctgtcacaaaccgcagagttaccacttggc
aaagtgaaaggccaagtgagccacatcccgaccacagagacgctgagcaaaatcaacagt
gtgctctgttacgacggttacatgactccggtcagccaacaaaatgggtatcactgtatt
ggcgcaagttatgatcgccagcaccttgatgcgacttttgatccgcaagcacaacacgaa
aatgcacaaaagctaattcactgcttgcctgagcaaacttggccattggaagtggatgtc
agcggcaatcaatcacgccaaggcgtgcgctgtgtgagtcgcgatcatctgccttttgtc
ggcaatgtcggcgaattttcgaaaatcaccgagcaatatcgcgatttagctcagcagcac
caagctgagccaatcgcgctctatccgcaactttatgcgttggtcgggcttggctcacgc
ggtttaagtagcgcgccgctgatggcagaacttcttgcttcgcaaatgtgtggcgacccc
atgccactaggcgtagatttgctcgaacagttacaccctagtcggatgtgggttcgaaag
ctgcgtaaaggcaaggcgctcacacaaaaagtctga
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