Vibrio cholerae O1 El Tor FJ147: IR04_16375
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Entry
IR04_16375 CDS
T03827
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00540
Lipopolysaccharide biosynthesis
vcf01100
Metabolic pathways
Module
vcf_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IR04_16375 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcf01005
]
IR04_16375 (lpxB)
Enzymes [BR:
vcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
IR04_16375 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
vcf01005
]
Lipid A
IR04_16375 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
AKA00665
LinkDB
All DBs
Position
I:complement(2485189..2486328)
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AA seq
379 aa
AA seq
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MNRPLRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAV
MGLVEVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVS
PSVWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAAR
QLLGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFE
QAWQQVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFL
AKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFTEMHQW
IRKDADQQAAQAVLHLIQK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagaccattacggattggcatagttgttggggagctctctggcgacaccttaggc
gaaggctttatcaaagcgatacgtgctcgttacccagatgctgagtttgtcggcatcggt
gggccgaaaatgaacgcacttggctgtcaatctctgtttgatatggaagagttggccgtg
atgggtttagtggaagtgcttggccgcttgccgcgcctgctgaaagtcaaagccgagctg
gttaagtatttcactgccaatccgccggatgttttcgtgggtatcgatgcgccggatttt
aatttacgccttgagctgagccttaaacaagcggggatcaaaaccgtacattacgtcagt
ccatcagtgtgggcgtggcgacaaaaccgcattcatggcattgccgcggcgacgcattta
gtgttggccttccttccatttgagaaagcgttttacgacaaattcaatgtgccttgtgag
tttatcggtcataccttggcggattcgatcccgttagcgtccgataagttagccgctcgc
caactgcttggtctggatgagcagcgccgctggttagccgttttgccgggcagccgtggc
agtgaaatgaagatgctcgcggagccctttatcgccacctgtcaaaaactgcaggcgcgc
tatccagatcttggctttgtggtggccttggtgaatgctaaacgtcgtgcgcagtttgaa
caggcttggcaacaagtcgctcctgagctgaattttgtgctggtggatgataccgcgcgc
aatgtgattactgcagccgatgcggtgatgcttgcctccggcacggtggccttggagtgc
atgctgcttaaacgccctatggtggtcggttatcgcgtgaatgcctttacggcctttttg
gccaaacgtctgctgaaaacgccgtatgtctctttgccgaatatcttggcgggagaggaa
ctggtgaaagagctgctgcaagatcattgcaccgtcgacaacctttaccatgaagtgagc
cgtttactcgaaagcgacaaccaagccttgatggacaaatttaccgaaatgcatcaatgg
atccgtaaagatgcggatcagcaagcggcgcaagctgtgctgcatttgattcagaaataa
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