Vibrio cholerae O1 El Tor N16961: VC_1047
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Entry
VC_1047 CDS
T00034
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00071
Fatty acid degradation
vch00280
Valine, leucine and isoleucine degradation
vch00310
Lysine degradation
vch00362
Benzoate degradation
vch00380
Tryptophan metabolism
vch00410
beta-Alanine metabolism
vch00640
Propanoate metabolism
vch00650
Butanoate metabolism
vch00907
Pinene, camphor and geraniol degradation
vch00930
Caprolactam degradation
vch01100
Metabolic pathways
vch01110
Biosynthesis of secondary metabolites
vch01120
Microbial metabolism in diverse environments
vch01200
Carbon metabolism
vch01212
Fatty acid metabolism
Module
vch_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VC_1047
00650 Butanoate metabolism
VC_1047
09103 Lipid metabolism
00071 Fatty acid degradation
VC_1047
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VC_1047
00310 Lysine degradation
VC_1047
00380 Tryptophan metabolism
VC_1047
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VC_1047
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VC_1047
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VC_1047
00930 Caprolactam degradation
VC_1047
Enzymes [BR:
vch01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VC_1047
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VC_1047
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VC_1047
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
SSTK-IP
Motif
Other DBs
NCBI-ProteinID:
AAF94206
UniProt:
Q9KT58
LinkDB
All DBs
Position
I:1116154..1118328
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AA seq
724 aa
AA seq
DB search
MCCGWLRRCYDSGGGIMDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFA
TLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFP
VVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLP
ALDLILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLA
NTDLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMT
RESKALRSIFFATTEMKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKD
VANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFED
LKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEV
IPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKL
DAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSG
KGFYTYKGSKKKEVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSAR
DGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGE
KFYP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgtgctgcgggtggcttaggcgctgctatgattctggaggtggaataatggataacaac
aatgcatttcagctctcgtttgatgagcagcattacgcttggctggcgattgatgtcccg
ggcgaaaaaatgaataccctgcaagcggcatttgcagaagagatgcaagccgtttttgca
acgctcaatgaaaagcgaggacagatcaaagggctgattatccactctcttaagccggat
aactttattgcgggcgcggatgtccgcatgctggaagcttgccaatcggtacatgaagca
caagcgttagcctcgcaggggcaacagatgttccagcagcttgccgatttgcctttccct
gtggtcgcggcgattcacggcccttgcttaggcggtggtttagaattggctctggcgtgt
gattatcgtgtctgtactgaagatgaggtaacacgtctaggcttaccagaagtgatgtta
ggtttgcttccgggctctggtggtacgcagcgtttaccacgtttgattggtttactgcct
gcgctggacctcatcttaacgggcaaacaattgcgtgccaaaaaggccaaaaaattgggt
gtggttgatgcatgtgttccgcactcagtactgttggatgtggccaaacgtcttctagaa
gaaaaagggcacaaaaagcgcgctcaagttacgctaccgatcaaagaaaaactgctcgcc
aataccgacttggggcgtaagttgatttttgaccaagcggccaagaaaacgcagcagaaa
acccgtggcaactaccccgcagcgcaagccattttagaggtcattcaatatggcctagaa
aaagggatgcatgccggcttggaatatgaagccaagcgtttcgctgaactggtgatgacc
cgagaatcgaaagcactgcgctccattttctttgcgaccacagagatgaaaaaagatctc
ggtgcggatgccaaacccgcacctgtggcggctgtgggcgtgctcggtggtggtttgatg
ggggctggcatcagtcacgttactgtggcgaaagccaaaacatcggtgcgcatcaaagat
gtggcgaatgatggtgtgctcaatgccctcaattacaactacaagctgtttgataagcag
agacagcgcaagattttgactaaagcacagttgcaagcgcagatgtcgcagctctcgggt
gggactggctttgtgggttttgatcgctgtgatgtagtgatagaggctgtgtttgaagac
ctgaaacttaagcaacaaatggtggcggatattgaagcgaatgccaaaccgacaacgatt
tttgcgaccaacacatcctcgctgccgatccatcagatcgcgagccaagcgcagcgtccg
caaaatattgtgggtttacattatttcagcccagttgaaaaaatgccgttggtggaagtg
attcctcacgcgaccacctcggatgaaaccattgcgaccgtggtgacattggcacgtaag
cagggcaaaacaccgattgttgttaaagactgtgccggtttttatgtcaaccgcatttta
gcgccttatatgaatgaagccgcgcaagtgctgatggcgggtgaacctatcgaaaaactc
gatgctgcgttactggattttggtttcccagtggggcctatcaccttgcttgatgaagta
ggggtcgatatcggagccaagatcatgccgattttggttaaagagcttgggccgcgtttc
caaggaccggacgtgtttgatgtgctgttgaaagataaccgtaaaggccggaaaagcggt
aaaggtttctacacctacaaaggcagcaagaagaaagaagtcgataaatccgtttataaa
ctgctgaagttaaccccggaatctaagctaaacgacaaagaaatcgcgatgcgttgcttg
ttgcctatgctcaatgaggcggttcgttgtctcgatgaaggcattattcgcagtgcacgt
gatggcgatatgggcgcgatttttggcatcggtttcccgccgttcttaggtgggcctttc
cgttacatggacacgcttggtttaaccaaagtggtggaaatgatgaaccaacacaccgag
aaatatggagagcggtttgctccatgtgacggtttgttgacgagagcgggattgggcgag
aagttctacccctag
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