Vibrio cholerae O1 El Tor N16961: VC_1593
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Entry
VC_1593 CDS
T00034
Name
(GenBank) GGDEF family protein
KO
K20954
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_1593
Enzymes [BR:
vch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VC_1593
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
VP4_helical
GGDEF_2
Salyut
Motif
Other DBs
NCBI-ProteinID:
AAF94747
UniProt:
Q9KRP3
LinkDB
All DBs
Position
I:1704617..1705906
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AA seq
429 aa
AA seq
DB search
MMDTDNRWRIALRSIRGELIIIGMIAVSIVLINTPKLLFEDKIHAYEKEQLQLTVELQKT
RIDYASLILEHLETHSLTPQLQEFFNLYHGNLCVLDENSPQQCPLSIIDAVQSTTSASDF
VASTSVNITFAEGSILFFQVQGKQIRVLWFNHASFWPAPQKNISLVLVRGNHIQFLDNPI
AHYNALLNYTILRHRDDYGTLQFENMELSFLRWNLGEYQLISVFNDKVRLFNLIYWVMSA
SLTLLLTLTWFLTRLNLQKVAAQRHVYIDNLTRLNNRHFLNKISTKFIEHPHSIAAMIDI
DHFKKINDQYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYML
DRLRQRVKDDHSLYGTTISIGFTFIDGSLPAAISRADTALYQAKEAGRNQVVADSEKEND
SAADLPIQC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacagataaccgctggagaattgcgcttcgctctatacgaggagaactgatc
attatcgggatgatagcggtcagcatagtattgattaacacgcctaaattattgtttgaa
gataagatccacgcttatgaaaaagagcaattgcaactgactgtcgaactacagaaaacc
cgtattgactacgcaagcctaattctagaacatctagaaacccactcattgactccacag
ttgcaagaattcttcaatctgtaccatggcaatttatgtgtgctggatgagaattcccca
caacaatgcccgttgagcattatcgatgcggttcaatccaccacttcagcaagtgatttt
gtcgcttctacctcagtaaacatcacgtttgcagaaggttctatcctattttttcaagtg
caaggcaaacagatccgagtgctatggttcaaccatgcttcattttggccagcaccacag
aaaaacatcagcttggtcttggttcgcggtaatcacattcagttcttagataatccgatt
gcacactataacgctctactgaattacacgattttgcgccaccgagatgattacgggact
ttgcagtttgaaaacatggagttgagctttcttcgttggaaccttggtgaatatcaattg
atcagtgtgtttaacgacaaagtacgcttgtttaatcttatttactgggtaatgtcggcc
agtttaaccctgttactgactttgacttggttcctcactcgactcaatctacaaaaagta
gcggcgcagcgtcatgtttatatcgacaacttaactcggctcaataaccgacattttctg
aataaaatcagtactaagtttattgaacaccctcactccattgccgcgatgatcgacatc
gatcactttaagaaaattaatgaccaatatgggcacattaccggagatcgcattctacag
gcggtggcctcttgtctgcgcaaaaatgtccgagatggagacaccattatccgctttggt
ggagaagagtttttactattgttccaagcccattcaaacaaagaagcttggtacatgctc
gaccgattgcgtcagcgagttaaagacgatcatagcttgtacggaacaacgatttcgatt
ggttttacttttatcgatggtagtttacccgctgctatttcgcgggcagatactgcactc
tatcaagcaaaagaagcaggacgtaatcaagtggttgccgacagcgagaaagagaatgac
tcagcagcagatttaccgattcagtgctga
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