Vibrio cholerae O1 MJ-1236: VCD_000998
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Entry
VCD_000998 CDS
T00903
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00260
Glycine, serine and threonine metabolism
vcj00630
Glyoxylate and dicarboxylate metabolism
vcj00785
Lipoic acid metabolism
vcj01100
Metabolic pathways
vcj01110
Biosynthesis of secondary metabolites
vcj01200
Carbon metabolism
Module
vcj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VCD_000998
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCD_000998
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VCD_000998
Enzymes [BR:
vcj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
VCD_000998
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
RNase_H2-Ydr279
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACQ62956
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All DBs
Position
2:1064629..1067493
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AA seq
954 aa
AA seq
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MTELLHSLSTQNEFVARHNGPDKQEQATMLKTVNAESLDALIAQTVPAQIRLEAPMQLAP
AQSEADMLATMKSFAKLNQLKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEIS
QGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSKSNLFFVADDVHP
QTIEVVKTRAAFLGFEVKVDSIDNITQQEAFGALLQYPGTTGEVRDLTDIIAKAQANKTL
VTVATDLLASVLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDAHKRTMPGRVI
GVSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMAAFYAVYHGPQGLRTIAR
RAHHLTAILAAGLTKAGYELAHQHFFDTLAINTGAKTDALYQAAQQANINLRKLPNQLGV
SFDETTTVADVEALFAIFGIKEEVHALSDRIATNELAAIPESCRRQSAFLTHPVFNTHHS
ETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQAAG
YAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSSA
HGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYEQQV
REVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIEGGVEGSDFAVSAADLGSASILPISWAYIAMMGADGLAEATKLAIL
NANYVMERLRPHYPILYRGANGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAPHTQADL
REEKWDRPYSREIACFPSAHTKASKYWPTVNRVDNVYGDRNLVCSCPSIDSYQD
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattacttcacagcctaagcacacaaaatgagttcgttgcacgccacaacggg
ccagataaacaagaacaagccaccatgcttaaaacggtgaatgcggaaagtttggatgcg
ctgatcgcccaaaccgtgcctgcccaaatccgtttagaagcgccaatgcagctcgcgccc
gctcaaagcgaagctgatatgctggcaacgatgaaatcgttcgccaaacttaaccagctt
aaacggactttcatcggtcagggttactacaacaccttcacaccgaacgtcattttacgt
aacgtgatggaaaacccgggctggtacaccgcttacactccttatcagccagaaatctcg
caaggccgtcttgaatcgctgcttaactatcagcagatggtgatggatttaaccgcgatg
gagattgcgaacgcgtcactgctggatgaagcgacagcggcggccgaagcgatggcactg
tgtcaacgcgcaggcaagagcaaaagcaacctgttctttgttgccgatgacgtgcatcca
caaaccattgaagtggtgaaaactcgcgccgcattccttggctttgaggtaaaagtcgat
tcgattgacaacatcacccaacaagaagcttttggcgcactgctgcaatacccgggtaca
accggtgaagtgcgcgatctgactgacatcatcgccaaagcacaagccaacaaaacctta
gtcaccgtagcgaccgatttactcgccagcgtgctgctcaaacctgcgggtgaaatgggc
gcagatgtcgtaattggttctgctcagcgctttggtgtacctatgggttatggcggccca
cacgcggctttcatggcaacacgtgatgcgcacaaacgcaccatgccgggacgtgtgatc
ggtgtttcgattgatgcgaaaggtaaccaagccttacgtatggcaatgcaaacccgtgag
cagcacattcgccgtgaaaaagcgacctccaacatctgtaccgcgcaagcgctgctggcc
aacatggctgcgttttatgcggtgtaccatggtccacaaggtctgcgcactattgcgcgc
cgcgctcaccacctcaccgcgattcttgctgctggcttaaccaaagcgggttacgaactg
gcgcatcagcatttctttgatacgctggcgatcaatacaggtgcaaaaaccgatgctctg
taccaagctgcgcaacaagcgaacatcaatctgcgtaaactgcctaatcagcttggcgtg
agctttgatgaaaccacgacagtggctgacgttgaagcgctctttgcgatctttggtatt
aaagaagaggttcatgcactttccgaccgcattgcgaccaatgagctcgccgcgattcca
gaaagttgccgtcgtcaaagcgcgtttttgactcaccctgtgtttaacacacaccacagt
gaaactcagatgctgcgttatatgaagcatctggaaaacaaagatttctctcttactcac
ggcatgatcccgctaggcagttgcaccatgaagctcaacgctaccgcggagatgattccc
gtcacttggcctgagtttggcgcactgcatccgtttgtaccaaaagcacaagctgcgggc
tatgcggcattggctgaagacctgaagcaaaaactgtgtgaaatcacggggtatgatgct
ttctcactgcaacccaactcaggggcttccggtgaatatgcaggtttagtggcgattcag
cgttatcaccaaagccgcggcgaaggccaccgcaatgtttgcctcatcccaagctcagca
cacggcaccaacccagctaccgcggcaatggtgtcgatgaaagtcgtggtggtgaaatgc
gatgaaaacggcaacattgatatggttgaccttgcggacaaaattgaaaagcacaaagac
catctttccagcatcatgatcacctacccttcaacgcatggcgtgtatgaacagcaagtg
cgtgaagtgtgtgaaatggtgcatgcagcaggtggtcaagtttaccttgatggtgcaaac
atgaacgcgcaagtggggctgacctcaccgggctttatcggctcagacgtatcacacctg
aacttgcacaaaaccttctgtattccacacggcggcggcggcccaggcatgggacctatc
ggtgtgaaatcgcacctagcacctttcctgccaggacacattgaaggtggcgtagagggt
tctgatttcgcggtttccgcagccgatcttggcagcgcgtccattctgccgatctcttgg
gcctacattgcgatgatgggtgcagacggtctggctgaagccaccaagctggcgattttg
aatgccaactatgtgatggagcgtctgcgtccgcactacccgatcctttaccgtggtgca
aatggtcgagtggcgcacgagtgcatcatcgatatccgtcctctgaaagaagaaactggg
attagcgaagaagatattgccaaacgcttgatggactacggcttccacgcgccaactatg
tcattcccagtagcaggcactttaatggttgagccaacggaatcggaagatttggcggag
ctggatcgcttctgtgatgcattgattgcgattcgtggcgagatcgacaaagtgaaaaat
ggcgaatggccgcttgaaagcaaccctctggtgcatgcgccgcatacccaagcggatctg
cgcgaagagaaatgggatcgtccatactcacgtgaaatcgcctgcttcccatcggcacac
accaaagccagcaaatactggccaacggtgaaccgtgtcgataacgtttacggcgaccgt
aacctcgtctgttcatgcccaagcattgacagttatcaggactaa
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