Vibrio cholerae O1 LMA3984-4: VCLMA_A1440
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Entry
VCLMA_A1440 CDS
T01871
Name
(GenBank) Response regulator VieA
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCLMA_A1440
Enzymes [BR:
vcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VCLMA_A1440
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Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AEA78667
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All DBs
Position
I:complement(1649138..1650883)
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AA seq
581 aa
AA seq
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MIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGISL
LSQLSLQAPKIGVVILSAVEDAILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQK
QTEPEASHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGML
SPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPILAIC
ERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPF
TELKIDRSFVHDLASNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQ
GYYAAKPMPIAQLSELYTKNRRQRLDGQSMDDGWQILLVDNHMLSATALQKVLNKEENVS
KVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGAILVLHDGLTAE
IQQDDSKAIVVKANTLMETSSRILQQAQQSTVRPPAQQEELAQLSERELTVAKMLVEGLT
NKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagaagatgatcgaattcaggcgacgagcctgaagctcaagctaagacagctt
gggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactgtgtaacaaa
gtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatgggatcagtttg
ttatcacaactgagtttacaggcacctaagataggtgtggtgatactcagcgcggtggaa
gatgcgattcttgagttaactcacaacatgtgtagtttggctggattcgcttatgttgat
cgcctgcctaagccttacgaagtggaagatttacagcgtgttgtcgaggggtttcaaaag
caaacggagcctgaggccagtcacaaacctgcaatcacgctaacctgtgacgagatcgaa
caagcttttttgcacgatcatatttttaattactatcaaccacagtttgattttcgcagt
ggggcgatggtaggcgttgaagcgctagtacgttacgagcacccaactcatggcatgtta
agtccagcggtgtttctgcctttaattgagcagtgtggcttgcatgagaaactcttcctt
acagtattagaaaagtcggtctctgcattggctagtattggtgctgacttgcagctttcc
gtcaacatcagccaacgcaacttgcaacactcgatctgtgatcctattctcgccatctgt
gagcggtatggttttcccgcaagcaaactgactctagagatgacggaacatgaggtgtac
aacggaaccccgacctcattggctaaccttgctcgcttgcgaatgtatggtgttggctta
tcgattgatgattttggtacgggttacgcgtcattaggtcaactggctcaactgccattt
acggaactcaagattgatcgcagctttgtgcatgacttggcaagcaactacaaacaccaa
caattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgcgtcgtcgaa
ggggtagagaacgaagagacatggcaatacttacgtcaacttggggtagatacttgccaa
ggttactacgcggctaagcccatgccgattgctcagttgagcgagctttacactaaaaat
cgtcgccaacgtttagatggtcaaagtatggatgatggctggcaaatcttgctggtggat
aaccatatgctcagtgccacggcattacaaaaagtgctcaataaagaagagaacgtcagc
aaggtgtttgtggcacaagatattgagcagacgctgcacaaactgcgagatttaccgatc
aacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggcatttcacgag
ttgcttgagccttactatcgaggggcgatcttggtgctgcatgatggattaaccgctgaa
attcaacaggatgattccaaagccatcgtcgtcaaagcgaatactttgatggaaaccagt
tctcggatcttacagcaagcgcagcagagcactgtgcgcccaccggcgcaacaagaagag
cttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtggaagggctgaca
aataaggaaatcgccctacaactcgatatcaatcaaaaaaccgtaagcacttacaagact
aggattatgaccaagttagggattaaatcggccatggaattggtgcgttttgtaacatta
aaatag
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