Vibrio cholerae O1 M66-2: VCM66_1022
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Entry
VCM66_1022 CDS
T00891
Name
(GenBank) GGDEF family protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCM66_1022
Enzymes [BR:
vcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VCM66_1022
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
GGDEF
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
ACP05340
UniProt:
C3LTW4
LinkDB
All DBs
Position
I:1090671..1092752
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AA seq
693 aa
AA seq
DB search
MGVFTIKCAAKNTTYHYSTSMLLNAFSRRVFLWLGWLLISTSSLAATSTTYKVATEADDV
VTRVLFDSIAHHFNLEIEYVNYPSFNDILVAIETGNADFAANITYTDLRAQRFDFSRPTN
IEYTYLYSYGGLRLPELRLVGIPKGTTYGTLLKEHYPYIQQVEYEGHLEALTLLESGRVD
GVVDAINQLKPMLLKGLDVQLLNDQLPIQPVSIVTPKGKHSALLGKIEKYAHSAHVQRLL
RESIQKYQLDIRKQALRQSVVESGLNVQRVLRVKLENNPQYALYQPDGSVRGISADVVFQ
ACEMLLLKCELVSNGQETWESMFDDLQDKSIDILAPITVSQQRKNLAYFSESYYHPQAIL
VKREHYKDDVYSNVSELVAERIGVIKDDFFEELLQQMLPNKILFSYASQEEKVQALLNKE
VDYIVLNRANFNLLLRESTEMLPIVEDTMIGSFYQYDIAIGFAKNPLGATLAPLFSRAIK
MLNTEQIIHTYDYQPNWRATLLAEKKYQRSTQWLFAMAFIVLFMVAFYLHGISHTDNLTK
LRNRRALYNRYRRGLSPRLSLVYLDVNTFKSINDQYGHEVGDKVLKQLAQRIEAVWRGRS
YRIGGDEFILIGECSAKRLEHVVAQCERFMFVDAERDVSFEVSVAIGIAKNRERTESLNE
VMHQADIAMYRAKAESTQSPFQAASKVKGLHIV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgggggtatttacgataaaatgcgcagcaaaaaatacaacataccattattcaacgtct
atgctacttaacgctttttcacgccgagtcttcctttggctaggttggctattgatttcc
accagcagtttagccgctacatctacgacgtataaggtcgccaccgaagcggatgacgtg
gtgactcgtgtgctttttgattcgattgctcaccacttcaaccttgaaattgaatacgtc
aactaccccagttttaacgatattctggtggcgatagagactggcaacgccgattttgct
gccaacattacttacactgatttgcgtgctcaacgttttgatttttcaagaccaaccaac
atcgagtacacctatctctacagttatggtggcctacgtttacccgagttgcgcctcgtg
ggtatcccgaaaggaaccacctacgggaccctactaaaagaacactatccctatatccag
caagttgagtatgaagggcatttagaagcgctcactttgctggaaagtggccgagtagac
ggagtggttgatgcgatcaatcagctcaaacctatgctactgaaagggcttgatgtacaa
ctccttaacgaccaattaccgattcagcctgtttctattgtgacgcctaaaggcaaacac
tcagcgctattgggcaagattgaaaaatacgcgcattcggctcacgtacaacgtttattg
cgtgaatcgatccaaaagtatcaattggacatccgtaagcaagctctgcgtcaatccgtg
gttgagagcggactcaacgtgcagcgtgtattgcgtgttaagctagagaacaacccgcaa
tatgcactttatcagccagacggttcggttcgtgggatcagtgctgatgttgtgtttcag
gcctgtgagatgctactgctgaaatgcgaattggtcagtaatggtcaagaaacatgggag
agcatgtttgatgatttacaggataaaagcatcgatattttggctcctataacggtttct
cagcagcgtaaaaacctcgcttacttcagtgaaagctactaccacccacaagcgattttg
gtcaaacgtgaacactataaagacgatgtgtatagcaatgtgtctgagttggtggctgaa
cgtattggcgtcatcaaagacgatttttttgaagagctgttacagcagatgctgccgaac
aagatcttgttcagctacgcaagtcaggaagagaaagttcaagccttactgaataaagag
gtggactacatagtgctcaatagagccaattttaatctcttgcttcgcgagtcaacggag
atgttaccgattgtagaagacaccatgattggcagtttctaccaatatgacattgcgata
ggttttgctaaaaatccacttggtgcaactctggcacctcttttctctcgggcaattaaa
atgctcaataccgaacagatcatacatacctatgattatcagccaaattggcgagccaca
ttacttgcggaaaagaaatatcagcgcagtactcaatggctttttgccatggctttcatc
gttttgtttatggtggcgttttacctccatggcatatcacataccgataaccttactaag
ttgcgcaatcgtcgcgctttgtataaccgataccgccgcgggttatcgcctcgcctaagc
ttggtttatcttgacgtgaatacgtttaaatcaatcaacgatcagtatggacatgaagtg
ggtgacaaagtccttaagcagttggctcagcgcatcgaagcggtatggcgtgggcgcagc
tatcggattggtggggatgaatttattttaatcggtgaatgttctgctaagcggcttgaa
catgtggttgcgcaatgtgaacgttttatgtttgtggatgcagagcgcgatgtcagtttt
gaagtgagtgtggcgattggtattgctaagaatcgtgagcggaccgaatcactcaatgag
gtgatgcaccaagcggatattgcgatgtatcgcgctaaggcggaatcgacgcaatcgcca
tttcaggctgccagcaaggtaaaaggattacacatcgtttaa
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