Volvox carteri f. nagariensis: VOLCADRAFT_64943
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Entry
VOLCADRAFT_64943 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_64943
Enzymes [BR:
vcn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
VOLCADRAFT_64943
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
VOLCADRAFT_64943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
SPL
Motif
Other DBs
NCBI-GeneID:
9625052
NCBI-ProteinID:
XP_002954663
JGI:
64943
UniProt:
D8U7I4
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MDVPGTQAVWVKTFGCSHNISDSEYMAGQLQDYGYRRESAGCNPADLWLINSCTVKGPSQ
AGMSSLIAVGRAGGKRLLVAGCVPQGDKRLPELQGVSVLGVTQIDRVVEAVEETLRGNTV
RLLAKKELPRLDLPKVRRNRHIEIVPISTGCLGACTYCKTKHARGHLGSYDPAALVERVR
QAAADPWVREIWISSEDTGAYGRDIGCSLPELLDALIAVLPPDGRTMLRVGMTNPPYVLE
HLEALSAALRHPCVFSYLHVPVQSGSDAVLDSMKREYTVAEFRRVVDTLLAGVPGMELAT
DIITAFPGESPGDHVRTLELLRQYRFPHTHISQFYPRSVGARGERGGCVGGRVGVGGRCV
GRVWVWVCGVRGWRRGGGRRGGERGVEGRGREGCVWGGVCG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccccggcacacaggccgtgtgggttaagacatttggctgctcccacaacatc
agcgacagcgagtacatggcagggcagcttcaggattacggatacaggcgagaatcagcc
ggttgtaacccggccgacctctggctgatcaactcctgcacggtgaagggccccagccag
gcgggcatgtcgtccctcatcgcggtcggcagggcgggcgggaagaggctgctggtggcg
gggtgtgtgccgcagggtgacaagcggctgccggagctccaaggtgtcagtgttctgggt
gtgacccagatcgaccgggtggtggaggcggtggaggagacccttcgtggcaacaccgtc
agactgctggccaagaaagagcttccgagactggatctccctaaggtccggcgcaaccgg
cacatcgagatcgtgcccatttctaccggctgtctcggcgcctgcacgtactgcaagacg
aaacacgcccgtggccatctgggcagctatgatcccgcggcgctcgtggaacgagtgcgg
caggcggcggccgacccatgggtacgggagatctggatcagctccgaagacaccggcgcg
tacggtcgcgacatcggctgctcactgccggagctgctggacgccctcattgccgtactg
ccgccggacggccgtacaatgttgcgggtaggcatgactaatccgccgtacgtgctggaa
cacttggaggccctctccgcggcgctccgccacccgtgtgtgttctcgtacctgcacgtg
cccgtacagagcggcagtgatgccgtactcgactcgatgaagcgggaatacacggtggcg
gagttccgccgtgtggtcgacaccctgctagccggggttcccggtatggagctggccacg
gacatcatcaccgccttccccggggagagcccgggggaccacgtgcgtaccttggagctg
ctcagacagtaccgcttcccacacacacacatctcccagttctatcctaggtctgtgggg
gcgaggggggagaggggagggtgcgtgggtgggcgtgtcggtgtgggtgggcggtgtgtg
ggccgtgtgtgggtgtgggtctgtggggtgcgtgggtggaggaggggtggagggaggagg
gggggggagaggggggtggaagggagggggagggaggggtgtgtgtgggggggcgtgtgt
gggtga
DBGET
integrated database retrieval system
