Volvox carteri f. nagariensis: VOLCADRAFT_74564
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Entry
VOLCADRAFT_74564 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03020
RNA polymerase
vcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VOLCADRAFT_74564
09124 Replication and repair
03420 Nucleotide excision repair
VOLCADRAFT_74564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_74564
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_74564
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_74564
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
VOLCADRAFT_74564
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VOLCADRAFT_74564
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VOLCADRAFT_74564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
9616688
NCBI-ProteinID:
XP_002950275
JGI:
74564
UniProt:
D8TVL7
LinkDB
All DBs
Position
Unknown
AA seq
176 aa
AA seq
DB search
MFYYLTLNKSIDIHPKHFGPKLREVIREKLIAETEGTCTGKYGYVVAVTKVDDIGRGRIR
QDQSGFATFDVTYGCIVCRPYKKEVLDAVVTSVNKMGFFAQAGPLQLFVTQHLIPEEFEF
DSSGDSSWVSVDQTTHIQPGTHVRVRILGIKYDPTEVFCIATMKDDYLGVIGSDFA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgttctattacctgacccttaacaagtcaattgacatccatcctaaacactttggacct
aagcttcgagaggtcattcgtgaaaagcttattgcagagactgagggtacctgtacgggc
aagtatggctacgtggtcgcggtgacgaaggtcgatgacattggccggggccgtatccgt
caggaccagtccggattcgccaccttcgatgtgacgtacggctgcattgtgtgccggccg
tacaagaaggaggtgcttgatgcggtcgtgacctccgtgaacaagatgggcttcttcgcc
caggcggggccgctgcagctcttcgtgacacagcacctgatcccggaggagttcgagttc
gactcctccggcgacagcagctgggtgtcggtggaccagaccacacacatacagcccggg
acacacgtgagggtgcggatcctgggtatcaagtacgacccgacggaagtgttctgtatc
gccacaatgaaagatgactatctgggagtgattggcagcgacttcgcgtga
DBGET
integrated database retrieval system