KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_74564
Entry
VOLCADRAFT_74564  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03020  RNA polymerase
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VOLCADRAFT_74564
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_74564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_74564
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_74564
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_74564
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     VOLCADRAFT_74564
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VOLCADRAFT_74564
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VOLCADRAFT_74564
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 9616688
NCBI-ProteinID: XP_002950275
JGI: 74564
UniProt: D8TVL7
LinkDB
Position
Unknown
AA seq 176 aa
MFYYLTLNKSIDIHPKHFGPKLREVIREKLIAETEGTCTGKYGYVVAVTKVDDIGRGRIR
QDQSGFATFDVTYGCIVCRPYKKEVLDAVVTSVNKMGFFAQAGPLQLFVTQHLIPEEFEF
DSSGDSSWVSVDQTTHIQPGTHVRVRILGIKYDPTEVFCIATMKDDYLGVIGSDFA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttctattacctgacccttaacaagtcaattgacatccatcctaaacactttggacct
aagcttcgagaggtcattcgtgaaaagcttattgcagagactgagggtacctgtacgggc
aagtatggctacgtggtcgcggtgacgaaggtcgatgacattggccggggccgtatccgt
caggaccagtccggattcgccaccttcgatgtgacgtacggctgcattgtgtgccggccg
tacaagaaggaggtgcttgatgcggtcgtgacctccgtgaacaagatgggcttcttcgcc
caggcggggccgctgcagctcttcgtgacacagcacctgatcccggaggagttcgagttc
gactcctccggcgacagcagctgggtgtcggtggaccagaccacacacatacagcccggg
acacacgtgagggtgcggatcctgggtatcaagtacgacccgacggaagtgttctgtatc
gccacaatgaaagatgactatctgggagtgattggcagcgacttcgcgtga

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