Volvox carteri f. nagariensis: VOLCADRAFT_80692 Help Entry VOLCADRAFT_80692  CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism vcn  Volvox carteri f. nagariensis Pathway vcn03020   RNA polymerase vcn03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:vcn00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     VOLCADRAFT_80692   09124 Replication and repair    03420 Nucleotide excision repair     VOLCADRAFT_80692  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vcn03021]     VOLCADRAFT_80692    03400 DNA repair and recombination proteins [BR:vcn03400]     VOLCADRAFT_80692 Enzymes [BR:vcn01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      VOLCADRAFT_80692 Transcription machinery [BR:vcn03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      VOLCADRAFT_80692 DNA repair and recombination proteins [BR:vcn03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       VOLCADRAFT_80692 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  9618733 NCBI-ProteinID:  XP_002949459 JGI:  80692 UniProt:  D8TT23 LinkDB All DBs Position Unknown AA seq 1879 aa AA seqDB search MASVDRFPYSSAPVRQVKAVQFSVWDPAEIKAYSVAELVTSETYEKGKAKLGGLSDPRMG TMDRGGICTTDGANANDSPGYFGHIALARPVYHIGFIKTVIRVLRCVSYHTSRLLVDKYA YGLRISDSEKRLRYFVHLCQGKKVDETTGNPQPSYRLDGLKIMAEFPKVKGDEEQEQDNV ERKQELTAARALEILKRIPNEDCKALGFDCRFTRPDWMIIQNLPVPPPPVRPSVMMDSSS RCEDDLTHKLAEILRTNNAIKKQDSTGTPQHVIAEQIMALQYHITTYFDNSSPGIPRSNQ KSGRPIKSISERLKGKSGRIRGNLMGKRVDFSARTVITGDPNIGIDELGVPWSIALNLTF PETVTPFNIEKLQKLVDNGPNPPPGETGAKHIIREDGRRINLAVLKSGADRRLEPGDKVG GFFCGRSHRRHTYTHSHSHRVFLQRASHLQVERHLTNGDLVLFNRQPSLHKMSMMGHRVR ILPYSTFRLNLSVTTPYNADFDGDEMNMHVAQTHETRAEMRELMMVPRNIVSPQANKPVM GIVQDSLLGTRLMTKRDIFIEKDVFMNTIMGIEDWDGTVPMPTILKPKPLWTGKQIFSMF VPDVNLKNKSAWYKDTDVQDMSVDDSQVLIRSGELLTGALCKKTVGNGAGGLVHLTWLEH GPHAARGFINNVQRTVNYWVLQHGMSIGIGDTVADAKTMTKVNEIIEEAKRKVKEVVEKY QQNALEAQPGRTIHESFEAQVNQVLNKCRDDAGKAAYMSVDLSNNIIKMVTAGSKGSNIN ISQMMGCVGQQNVEGKRIPFGFQNRTLPHFNKDDLGPEARGFVGNSYLRGLTPQEFFFHA MGGREGLIDTAVKTASTGYIQRRLVKAMEDMVVRYGGTVRNSQGDVVQFLYGEDGMDAVR IESQTFEHLKWDPVKIDKVYRVDTSRDLAPDWLSNDEYEALRTDPETEQALREEMAQLKE DLRVLREEVLTTGDEKVNIPLNLARLIWNAQTKFGCKPHRPGWTGLPVKEVVVKVQDLCR RLVVVVGSDGLSVEAQRNATIMFHSMVRMHLAVKRVLSEYKLNQKAFDWLLGEIETRFFL ALSHPGDCVGTVAAQSLGEPTTQMTLNTFHFAGVSAKNVTLGVPRLTELINLAKNIKTPT LTVHLLPGLRENKDRAKEVQAKLEYTCFKNVVKTTEIWYDPVDPGNPNQTIIGEDEEMLS SYYDLAGEEDLAVLPRLSHWLLRFELNRGTMLDKGLTLGAVQKALQDEWEDFINVLVNDD NAEKLIMRIRVMKTEEASKDESADPTEDTMLKLSAAIMDVRLHGVPNIRKVFIRAENQHI YDRERGSFRKYEEWILDTEGINLEQVLAFEGVDPRRTMSNSIIEVLEVLGIEAARAALLK EVRNVISFDGSYVNYRHLACLVDIMTCKGCLMAITRHGINRNGNGPMTQCSFEETVDILY RAAMFGERDRLTGVSDNIMMGNMCPLGTGAFDLLLDESALESAFDVQASVCASATPGRYT PGRSPHRTPGPMSPSHMLSPMHSPFIGGGAFSPIVGGAFSPVHGSGAPMSPGYSPTSPGY SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPGFSPTSPAYS PTSPTYSPTSPTYSPTSPTYSPTGPAYSPTSPSERPTGSRFSPASPNYSPTSPNYSPTSP QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTAAAKPSPAYSPTADVSPVYSPTADVSP SYSPTADVSPPQGGAGPSPLTGGGGQEYSPTSAHYSPGVLAGLSPPFGQGGGGGGGGGQG TGTYSPQRTSPTFSPSFKP NT seq 5640 nt NT seq  +upstreamnt  +downstreamnt atggccagcgtcgaccggttcccttacagcagtgcgcctgtgcggcaggttaaggccgtg cagtttagcgtctgggatccagccgaaatcaaagcatactccgtcgctgaacttgtaacc agcgagacctatgagaagggaaaggcgaagctgggtggcctgtcggacccccgtatgggg acaatggaccgtggtggcatctgtaccaccgacggtgccaacgctaacgacagcccggga tacttcggccatattgctctggcacggcccgtgtaccatatcggcttcatcaaaaccgtc atccgtgtgctgcgctgcgtcagttatcacacgtcgcggctactggttgacaagtacgcg tacggcctccgcatcagcgactcggagaagcggctgcgctactttgtgcacttgtgccag ggcaagaaggtggacgagacgacgggcaacccacagccgtcgtacaggttggacgggctc aagattatggccgaattccccaaggttaagggggacgaggaacaggagcaggacaacgtg gagcgcaagcaggagctgaccgctgctcgcgcgctggagatcctgaagcgcattcccaac gaggactgcaaggcgctgggcttcgactgccgctttacgcggccggattggatgattatc cagaacctgcccgtgccgccgccgccagtgcggccgtccgttatgatggacagcagcagc cggtgcgaggacgacctgactcacaagctggcggaaatcctccgcaccaataacgctatc aagaaacaggactccacgggcacaccgcagcacgttattgctgagcagatcatggcgctg cagtaccacatcaccacctactttgataactccagtccaggcattcccaggtccaaccaa aagtcgggtcggccgatcaagtctatcagcgagcggctgaagggtaaatcggggcgcatc cgcggcaacctgatgggcaagcgtgtggacttctcagcgcgtaccgtcatcacgggtgac cctaacatcggcattgatgagctgggtgtgccctggtccattgcgctcaacctgaccttt cccgagacggtgacgcccttcaacattgagaagcttcagaagctggtggataacggtccg aacccccctcccggcgagacgggtgccaagcacatcatccgggaggatggtcgccgcatc aacctggcggtgctgaagagtggggcggaccgccgattggagcctggggacaaggtgggc gggtttttttgtgggcgttcccaccgccgacacacatacacacactcacactctcaccgt gtgtttttgcaacgtgcttcgcacctgcaggtggagcgccatctcaccaacggtgacctg gtgctgttcaaccggcagccctcgctgcacaagatgtctatgatggggcaccgagtgcgc atcctgccctactccaccttccgcctgaacctgagcgtgacgacgccctacaacgccgat ttcgacggtgacgagatgaacatgcacgtggcacagacacacgagacacgcgccgagatg cgcgagctgatgatggtgcctcggaacatcgtgtcgccgcaggccaacaagcccgtcatg ggcatcgtgcaggactcgctgctgggcacccgcctcatgacgaagcgtgacatctttatc gagaaggacgtcttcatgaacaccatcatgggcattgaggactgggacggtactgtgccc atgcccaccatcctcaagcccaagccgctgtggaccgggaagcagatcttctccatgttc gttccggatgtgaacctgaagaacaagagcgcctggtacaaggacacggacgtgcaagac atgtctgtggacgactcgcaggtgctgattcgctccggggagctgcttacgggtgcgctg tgcaagaagaccgtcggcaacggcgcgggtggtctggtccacctaacttggctggagcat gggccccacgcggcacgcggctttatcaacaatgtgcagcgcaccgtcaattactgggtg ctgcagcacggcatgagcatcggcatcggagacacggtggccgacgccaagactatgacc aaggtcaacgagattatcgaggaggccaagcgtaaggtgaaggaggtggtggagaagtac cagcagaatgcgctggaagcccagccgggtcgcactatccacgagagcttcgaggctcag gtgaaccaggttctgaacaagtgccgtgacgacgccggcaaggccgcctacatgtcggtg gatctgtccaacaacatcatcaagatggtgacggcgggctccaagggctccaacatcaat atctcccagatgatgggttgtgtggggcagcaaaacgtcgagggcaagcgcattccgttc ggcttccaaaaccgcacgttgccgcacttcaataaggacgatttgggtcccgaggcccgc ggtttcgtgggcaactcctacctacgaggcctcacaccgcaggagttctttttccacgcc atgggtggtcgcgaaggtcttatcgacacggccgtcaagaccgcctccaccggttacatc cagcgaaggctggtcaaagccatggaggacatggtggtgcggtacggcggtaccgtgcgt aacagccagggagatgtcgtgcaattcctctacggcgaggatggcatggatgctgtgcgc attgagagccagacgtttgagcacctcaagtgggacccggtgaaaattgacaaggtgtac cgggtcgacacctcacgcgacctggcgcccgactggctgtccaacgatgagtacgaggcg ctccgtacagaccccgagacggagcaggcgctccgggaggagatggcgcagctgaaggag gacctgcgtgtgctgcgggaggaggttcttaccaccggggatgagaaggtcaacattccg ctcaacttggcgaggttgatctggaacgcgcagaccaagttcggctgcaagccgcacagg cctggttggacgggtttgccggtgaaggaggtggtggtcaaggttcaggacctgtgccgg cggctggtggtggtggtgggaagcgacgggctgtccgtggaggcccagaggaacgctacc atcatgtttcactctatggtccgcatgcacctggccgtcaagcgggtgctgtccgagtac aagctcaaccagaaggcctttgactggctgttgggcgaaattgagacgcgcttcttcctg gcgctgtcccacccgggcgattgtgtgggcactgtggcggcacaatcgctgggagaacct acgacgcagatgacgctcaacacgttccactttgctggtgtgtccgccaagaacgtgacg ctgggtgtgccccgcttgacggagcttatcaacctggccaagaacatcaaaacgcccaca ctcacggtgcacctgctgcccggactgcgcgagaacaaggaccgggccaaggaggttcaa gccaagctggagtacacatgcttcaagaacgtggtcaagaccacggagatttggtacgac cctgtggatcccggcaaccccaaccaaaccattattggggaggatgaggagatgctcagc agctactacgacctggcaggcgaggaggatctggcggtgctgccccggctgtctcactgg ctgttgcgcttcgagctcaaccgcggcaccatgctcgacaagggcctgacgctgggagcg gtgcagaaggccctgcaggacgagtgggaggacttcattaacgtgctggtgaacgatgat aacgcggagaagctcatcatgcgcatccgagtgatgaagacggaggaggcgagcaaggac gagtctgcggatcccaccgaggacacgatgctcaagttgtccgctgccatcatggacgtg cgactgcatggcgtgcccaacatccgcaaggtgttcatccgcgcggaaaaccagcacatc tacgacagggaacgtggctccttccggaagtatgaggaatggatcctggatactgagggc atcaacctggagcaggtgctggcctttgagggcgtggacccccggcgcaccatgtccaac agcatcatcgaggtgctggaggtgctggggatcgaggctgcgcgtgctgcactgctgaag gaggtccgcaacgtcatttccttcgatggctcctacgtcaactaccgtcacctggcttgc ctggtggacatcatgacatgcaagggctgtctcatggccatcacccgtcacggcattaac cgcaatgggaacggacccatgacgcaatgcagcttcgaggagacggtggatattttgtac cgggcggccatgtttggcgagcgtgaccggctgacgggtgtgtcggacaacatcatgatg ggcaatatgtgtcctctgggcaccggcgccttcgatctgctgctggacgagtcggcgttg gagagcgcttttgacgtgcaggcgagtgtatgtgcgagtgccacaccgggccgctacacg ccaggccgctcgccgcaccgcacgcctgggcccatgtcgccttcgcacatgctatcgccc atgcattcgcccttcatcggcggcggcgcgttcagtcccatcgtgggcggcgccttcagc cccgtgcatggcagcggggcccccatgtcgcctggctacagcccgacgtcgcctggttac agcccaacctcccctgcctactcgccgacgagcccggcgtactcgcctacctcacctgcc tactccccgacgtcgccagcctattcgcccacctccccagcgtactcccccaccagtccg gcatattcgccaacgtcgccggcgtattcacccacgtcgccagcttactcgccaaccagc cctgcctactccccgacgtcgccagcctactcgccaacctccccggcatattcacccaca tccccggcgtactcgcccacgagcccggcgtattcaccgacgagcccggcctattcacca acgtcgccggcctactcgccgacctcacccggcttctccccgacatcgccggcgtattca ccaaccagcccaacttactcgcccacgagcccgacctacagcccgacatcgccaacctac agcccgaccggtccggcctacagcccaacttcaccgtcggagcgcccaactggctcgcgc ttcagcccggcgtcccccaactacagccccacctcacccaactacagcccgacaagtcct caatacagccctacaagtccgcagtacagcccgacaagtccgcagtacagtccgacaagt ccgcagtacagtccgacaagtccgcagtactcccctacggcagccgccaagccaagcccc gcctattcgcccacagcggacgtctccccagtgtattcccctaccgcagacgtgtcacca tcgtactccccgacggcggatgtcagtccaccgcagggcggcgcgggaccgtcaccgctg actggcggcggcggccaggagtactccccaactagcgcacactacagtccaggcgtgctg gcgggtctatccccgccgtttggccaaggcggaggcggtggcggtggcggagggcagggg acggggacatatagcccgcaacggaccagcccaacatttagtccatcatttaaaccgtga

DBGET integrated database retrieval system