KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_96085
Entry
VOLCADRAFT_96085  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VOLCADRAFT_96085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_96085
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VOLCADRAFT_96085
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     VOLCADRAFT_96085
   FA (Fanconi anemia) pathway
    Downstream FA components
     VOLCADRAFT_96085
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD ResIII
Other DBs
NCBI-GeneID: 9626334
NCBI-ProteinID: XP_002955234
JGI: 96085
UniProt: D8U962
LinkDB
Position
Unknown
AA seq 1606 aa
MDKMLRALAEQGNALLEMPTGCGKTLSLLCAALAWQTQRKKELFDRSATQLLRTAPRGDA
GGPPKSTAAVGSTADREGGKPRQAKGTGAYGGAKGAGDDSEESSDDFEPRKAARTQAPAP
SADGLRGQLPAKQGQTAEAPSHKSAAASAAAAYPWEGGASHSSPNSSPAENSDQDDENSD
PSMFDIRGTDEDDVQDFKPPKIFFATRTHSQIAQVVRELKRSGYKPTMAILAAKQHYCIN
KKVRRTGRVDEECDKLLKESEYGCRYRGKAAGRAGRTPPEIGLHDIEELAAKCSNGRNPT
CAYFVARDLALTADLVFCPYTYLLDPLVRAALGIDVGGAVLIFDEAHNMEDVCREGGSMD
LDLDVLREVEVSFRLAAQLTSRPELYSPLAEVVGRLGAVLGRYEASSAGMTACGFEQHEA
VFQGPRALNMLSEAGLGPSAVGELNRLYEQAKAFEEKATFSLDGDAADEAVPASVTRPGA
GGAALATLGRLLTVLRLMYGTAPQLPPQSQLIPHLPRPPLPPPPNHYHPNDHPVQQQQQQ
QGRLPYPHPPVAAAAVGPAVKSLVHAAALGGSGGSGGGGGGGGIGAGGDGVSSSAGGFIS
SMGNGGGGGGGGGFIPTGSGGGAVRYGSGGGGGLMMAPPPVPAPLRDNSGDYRLVVKRWI
AHGAKDRRKARSRLPRGEGDGNGEGLGRGGVGPGAAVSLGLWCLNPAVAFRSLADKAHSV
VLTSGTLAPLDSFASELGTEFHFRLEAPHVVDMSRQVWAGVVPRGPGGSLLSATYRESGT
LAFQDDAGEAVLRYCQVIPGGVLLFMPSYSLLDRLMSRWQSSTGLWSRLEAVKTVVVEPR
EAGRGFEEAMSSYYGAASEGIDFADGFARGVILLGIPFPAIKDTKRLLTGDAWYNQQAFR
ALNQAVGRCIRHKYDWGAIILLDERFRGSGRQQQLSRWVRTAVKVHEDFNTSITELDAFC
KRLTAEPPRPPPPPPPATAALGSSGTTCQPAHALPAHARTQAPVAAPPAPAGKQQQGQRG
KGSVEIQYEEDVVPPPDWPPGQGQANGGGGGGRFDRFRLGNTLPASLPAEGQQKLTSVAA
ASTSAVGGSGASGRPITAYFAAAQGTGGSKPLAAAGAPSKCSGGAGGGGGGGAGGGGSTC
GGGSTCGGGSTCGGGMPVRVMLQPQNSCEPPQPQPPLPLPLLHSTQHATQQYQVPGSRPG
LNNRSVTGTNLPVEVQNTALPAPPEHPPHKGCSPYDQKGRQQPEPAPHGGQLRHHCQQHP
QPQQQQAQLLMSPPRPNQLPQPWQGDVLCCAPVGGSSAAVLSSQPSTRPLQQQPHTPVEM
LRPASLTPLLGQVPALPSYNYSTPGFCGMDAQRQALEAAAQPLSASASTIPQTAGSQQAP
SSGHFWMQNHQQHQPSGNMEQGNVHRPYQASTPQPPHQQQQLPTQQPQQQWQQQQHLHQQ
QTQYNLEARHGGEGGSQTGIPAAPGAPAWWCGGAQMQPKNHQTCGQQHQQQQYPHQHQHS
DLGRLAGPDANTTALLEGSTRNLSCAASKPSEATGSIAGCSISAAAGRGNGAAACVSARP
RKRLTSNRAREAASKRCRLQKKDAGVLGQPDGCALDDSVDDSDDFV
NT seq 4821 nt   +upstreamnt  +downstreamnt
atggacaagatgctgcgggcgcttgctgaacagggcaacgcgctactggagatgcccaca
ggttgcggcaagacgcttagcctgctgtgtgccgcactggcttggcaaacacaacgcaaa
aaggagttgtttgaccgctcagccacacagctgctacgcactgctccgcgtggggacgct
ggaggacctcccaagtctactgctgctgttggtagcactgccgatcgcgaaggtggcaag
ccccgccaagccaaaggcacaggcgcctacggcggtgcgaaaggcgcaggcgacgactct
gaggaatcctccgacgactttgaaccccgtaaagcagcacgcacacaagccccagcacct
tctgcggacggcctccgaggacagcttccagccaaacagggccaaactgccgaagctccc
agccataagtcagcagctgcatcagcagcagcagcatatccttgggaaggtggcgcctcg
cattcctcccctaactcctccccggccgagaacagcgaccaagatgatgaaaactccgat
ccttccatgttcgatatcagaggtactgacgaggacgacgtgcaggacttcaagccaccc
aagattttttttgcgacgcgcacgcattcccagattgcgcaagtggtccgggagttgaag
cgttcgggttacaagcccaccatggccatcttggccgcaaagcagcactactgcattaat
aagaaggtacgccgaacgggccgtgtggatgaggaatgtgacaagttgctcaaggaatca
gagtacggatgtcgttaccgaggcaaggcggcgggtagagccggtagaacccctccggag
attggtttacatgacatcgaggagctggctgccaaatgctccaatggccgcaatcccacc
tgtgcgtacttcgtcgcccgggacctcgccctgacagcggatctggtgttttgtccgtac
acgtaccttctggatccgttggtccgtgcggcgctgggtatcgatgtgggcggagccgtg
ctcattttcgatgaagcacataacatggaggacgtgtgcagagagggtggcagcatggac
ttggatcttgacgtacttcgagaggtggaggtgtcgtttcgtctggcagcccagctcact
tcgcgacctgagctgtactcccccctggcggaggtggttgggcggttgggtgccgtactg
gggcggtacgaggcgagctcggcgggcatgacagcgtgtggctttgagcagcacgaggcg
gtgtttcagggacctcgggcccttaatatgttgagtgaggcgggactaggcccctcggcg
gttggtgagcttaaccgactgtacgagcaagccaaggcatttgaggaaaaggccacattc
tcccttgacggcgacgctgccgatgaagccgtacccgcctccgtcacccgccctggtgcc
ggcggcgcggcgctggcgaccttgggccgcctgctgaccgtactacggctcatgtacggc
accgcaccgcagctgccgccgcagtcgcagctgatacctcaccttccccgtcctcctctt
cccccgcctcctaatcattatcaccctaatgatcatccggtgcagcagcagcagcagcag
caagggcggctgccgtacccccatcctcctgtcgccgccgccgccgtcggacctgctgtc
aagtcgttagtccacgccgctgccctgggtggaagcggcggcagcggcggcggcggaggc
ggaggcggtatcggtgcaggtggtgatggtgtcagtagtagtgctggtggtttcatttcc
tcgatgggtaacgggggcggcggaggcggaggcggaggcttcattcccaccggcagtggc
ggcggcgccgtccgctatggcagcggcggcggcggcggcttgatgatggccccgccgccg
gttccagctccccttcgcgacaacagcggcgactaccgattggtggtgaagcgatggatc
gcgcatggcgccaaggaccggagaaaagccaggtcacgtcttcctcggggtgagggtgac
ggcaatggcgagggcctggggaggggcggggtggggcctggtgcggccgtgtcgctgggg
ctgtggtgcctgaaccccgctgtggcgtttcggagcctggcggataaggcccacagcgtc
gtactgacgagcggcaccctggcccccctggactccttcgcctcggagctgggtacggag
ttccatttccggttggaggccccgcatgtggtggatatgagccgccaggtgtgggccggt
gttgtccctcggggccctggtggctccctcctctccgccacgtaccgggagagcggcaca
ctcgcgttccaagacgatgccggggaggcggtgctgagatactgccaggtcatccccggc
ggtgtgctgttgttcatgcccagctatagcctgttggacaggctgatgagtcgctggcag
tcgtccacggggttatggtcccggttagaagccgtcaagacggtggtggtggagccccgg
gaggcgggtcggggcttcgaggaggccatgagcagctactacggggccgcgtctgagggt
attgacttcgcggatggttttgcccggggggtcattctgttggggatccccttcccggcc
atcaaggataccaagcggctgctgaccggggatgcctggtacaaccagcaggccttccgg
gcgctgaaccaggctgtgggccgctgcattcgccacaagtacgactggggcgccatcatt
ttgttggacgagcggtttcggggcagtggccggcagcagcagctgtcccgatgggtgcgc
acggcggtcaaggtccatgaggacttcaacaccagcatcaccgagttggacgccttctgc
aagcgcctcaccgcagagcccccgcggcctcccccacccccaccccctgcaacagcggcc
ctaggcagcagcggcaccacatgccagccagcacatgcgctgccagcacatgcacggaca
caagccccagtcgcagcaccaccagctccagctggaaagcagcagcagggtcaaaggggc
aaaggcagcgtggagatacagtacgaggaggatgtggttccccctccagattggccgccc
ggacaaggacaggccaacggtggcggcggtggcggccgtttcgaccggtttcgcctgggc
aacacattgccagcgtcattgccagcagaaggacaacaaaaattgacctctgtcgctgcc
gcctccacctccgcggtgggaggaagtggtgcttctggaagaccaatcactgcttacttt
gccgcggcacaagggaccggtggcagcaagcctctagcggcggcaggggcaccaagcaaa
tgcagcggtggtgctggtggtggtggtggtggtggtgctggtggtggtggcagtacttgt
ggtggtggcagtacttgtggtggtggcagtacttgtggtggtggcatgccggtcagagtg
atgctgcaaccacagaacagctgcgagccgccacagccacagccaccgctaccgctaccg
ctactgcattccacccagcatgcaacgcagcagtatcaggtgccggggtcacggccaggg
ctcaacaacaggtcggttacggggacaaacttgccagtggaggtccaaaacacggcactg
cccgcgccacccgagcacccaccccataagggatgcagcccatatgaccagaaaggccgg
cagcagccagagccagcaccacacggcggacagctacggcaccactgccagcagcatcct
cagccgcagcaacagcaagcacagctgctcatgtccccaccacgaccaaatcagcttcct
cagccttggcagggagatgtgttgtgctgtgcgccggtcggtggatcatcggctgccgtg
ctatcatcacagccttccacacggcctctgcaacagcagccacatacgcctgttgagatg
ctgcggcccgcttctctgacacccctgctcgggcaggtgccagcgctgccgagctacaac
tacagcacaccgggattctgcggcatggacgcacaaaggcaagccctggaagcagcggca
caaccgctatctgcgtcggcttccacaatccctcagactgcaggttcgcagcaagcgcct
tcctcggggcatttctggatgcagaatcatcagcagcaccagccaagcggcaacatggaa
caaggcaacgtgcacagaccctaccaggcttcaacaccacagccgccacaccagcagcag
cagctgccgacgcagcagccacaacagcaatggcagcagcagcagcatctacaccagcag
cagacacagtacaatctagaagcccggcacggtggagagggcggcagtcaaacggggatc
ccagcagcgccgggagcgccggcttggtggtgcggcggcgcgcagatgcaacccaagaac
caccaaacatgtggacaacagcaccagcagcaacaatacccacaccaacaccagcattcg
gatttgggacgccttgcaggtccggatgccaacactacggcgcttttagaaggatcgacg
aggaacttgagctgtgccgcgtcgaagccctcggaggcgacgggaagcatcgcggggtgc
agtattagcgccgctgcaggacgaggcaacggcgcggccgcttgtgtatcggcgcggccg
cgcaagcgcttgacatctaaccgcgcgcgggaagctgctagcaagcgctgtcgtttacag
aagaaagatgctggggtccttgggcaacctgacggctgcgctttggatgactcggtagac
gactctgacgattttgtttag

DBGET integrated database retrieval system