Vibrio cholerae O1 O395: VC0395_A2389
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Entry
VC0395_A2389 CDS
T00520
Name
(GenBank) GGDEF family protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC0395_A2389
Enzymes [BR:
vco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VC0395_A2389
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ABQ21248
UniProt:
A0A0H3AKT6
LinkDB
All DBs
Position
2:complement(2543017..2545506)
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AA seq
829 aa
AA seq
DB search
MFTVSRLIPDLASANQVLETMDLPHGQSILVQIFSPLSREHVVQLARLIRSRHPQACLLG
CSTEEVIFQGEVHHQVTLLQITVFEQTYLSRAVVDYSDDEAADAERLARQLELTSMSRAV
VCFSWQMDTLQVARFALRDTQGAPVPVAGGAAKQTPSGRWVLLDEACYQNASVAIALHGE
ALYVETGGYTEWQPVGRTYRVTAVEGDRVLRLDDEPIEAIYQHNLGAQADLPHDWLISFP
LMKGECRHQDLYLPLGLAEEGGLRFNRPLALQDEVRFCFDHPSLTLERVYLTAQQLQAKQ
CQQVWVFNCALRLNFMHENHELQPLQAVAPTDGCYCWGELLYEHGQQQVMHHSMTFLALR
EGAVRDDLVPIPLPSYPEGMTSPLFNLIRHAFHDLDAMTDNLAQQIRAQTSLLTASYRRD
RRTGLPNRVVLRERLANFAANEHLIALKVTNFNQINEKYGYPVGDKLLRDLSEQFQVFLD
QKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSIS
LCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRV
SRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEIILPGNFLPIITDTHLYTRLSR
QMITHTFNMMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVADPARVGLEVLESEQIKD
YGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRI
AEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRLG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtctcgcgtctcatcccagatttagcatcggccaatcaggtgctcgaaacg
atggatcttcctcatgggcaatccatcttagtgcaaattttctctcctttgagtcgcgag
catgtcgtgcagcttgcgcggctcatccgtagtcgccatccacaagcttgcctgcttgga
tgcagtaccgaagaggtgattttccaaggggaagtgcaccatcaggtgacgttgctgcaa
atcaccgtgtttgagcaaacttatcttagccgtgctgttgtggattacagtgacgatgag
gctgccgacgcggagcgtttagctcgccagctcgagctcactagcatgtctcgagcagtg
gtctgtttttcttggcagatggataccttgcaagtcgcacgatttgccttacgcgacacg
cagggtgcaccagtgcccgtcgctggtggagccgccaaacaaactcccagtggtcgctgg
gttttgctcgatgaggcttgttatcaaaacgccagtgtggctattgcgctgcatggcgaa
gcgctttatgtcgagacgggtggttacactgagtggcagcctgttgggcgcacctatcgg
gtcacagccgtggagggagatcgggtcttacgtttggatgatgagccgatagaggcgatt
tatcagcacaatttgggcgcgcaagccgacttaccccatgactggctgatcagttttcca
ctgatgaaaggggaatgccgccaccaagatctttatctgccgctcgggctggcggaggaa
ggcggactgaggtttaaccgcccactggcgctgcaagatgaagtgcgcttttgttttgat
cacccgagtttaaccctagagcgggtctatctcaccgcgcagcaactacaagccaagcag
tgccaacaagtgtgggtgtttaactgtgcgctgcgtttaaacttcatgcatgagaatcac
gagttacaaccgcttcaggcggtggcgccgaccgatggttgttactgttggggagagctg
ctgtatgagcatggtcagcagcaagtgatgcatcatagcatgacgtttcttgccttgcgt
gaaggggcggtgcgtgacgatcttgtcccaatccccttgccgagttatccggaagggatg
acgtcccctctgtttaatttgatccgccatgcgtttcatgatttggatgccatgacggac
aatttggcacagcagatccgcgctcaaacctcattactgacggcgagttaccggcgtgac
cgacgtaccggcttacccaatcgagtggtgttacgtgagcgattggcgaacttcgcggcc
aatgagcacctaatcgccctgaaagtgaccaacttcaatcagatcaatgagaagtacggt
tatccggtaggcgataagctgcttcgtgatttgagtgaacagtttcaggtctttttggat
cagaaattggcagggcagagcggtttgtatgcgattggggtcggtgagtgggcaacggtt
tttcgtgccaagctggacgggaaaagtattcatagccatttctatcagtttgtggagcag
ttggagcacgtcaacttcgagccctacggtttaccgaatgtggattatctgtcgatctcg
ttgtgcgctgggttagtcagtcagggcgattttgcagagcattcgccggatgagctattg
ctgcgtgctatcgaagcacgccgctacgcgtttaacaacaaccaccatttctgtaatgca
gcgcgtttaaaagtgcaagaaagtgttcgtcaggagcggctgaattggctatcgcgggtt
agccgcgcggtggtacgtgatgatgtggtggtttatgcgcagccgatttgtcaggcgcgt
agtcacattgtggcttcctacgaatgtttagtgcggattgaagatgaaggggaaattatc
ttgcctgggaattttctcccgatcatcaccgatactcacctctatactcgtttgagccgg
cagatgataacgcataccttcaatatgatgcgtcatcgcccggaggcgttttcgatcaat
ctttcaccgcaagatttgatgagtgagcgcaccttgcagcatttggaagcggcaatcaaa
tcggtggccgatcccgcccgtgtcgggctcgaagtgttggagagcgaacaaatcaaagat
tacgggcggatgattgaagtgtgtaaccatttccgcacactgggcgcgaccatcattgtc
gatgattttggcagtggttattccaatattgatgagatagtgaagcttgagccgcaggtg
attaagctcgatggcagcttgatccgcaatattgatcaggatgtgaagcagcgccggatt
gccgagcagctcgtgaaattgtgtcaggtactgaatgcgaaaaccgtggcggagtttgtc
cataaccagacggtttgtcgcatcagtgaagatatgggtgtggattatttacaaggctat
ttcttgggtcgaccttcacgcttgggttaa
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