Vescimonas coprocola: MM50RIKEN_02240
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Entry
MM50RIKEN_02240 CDS
T07634
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcop03009
]
MM50RIKEN_02240 (rimO)
Enzymes [BR:
vcop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MM50RIKEN_02240 (rimO)
Ribosome biogenesis [BR:
vcop03009
]
Prokaryotic type
ribosomal protein modification factors
MM50RIKEN_02240 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCK80461
UniProt:
A0A810Q4V4
LinkDB
All DBs
Position
complement(225627..226964)
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AA seq
445 aa
AA seq
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MNVSFISLGCDKNRVNTEQMMALCLQAGHTVQEDCSGSDVVVINTCGFIDSAKSEAIDTI
LAAAELKAAGEVGKILVTGCLSQRYQADILEELPEIDGIMGTGCFGDIVTALEQVVNGQE
CRHFADINGPVEELPRVLSTPRQYAYLRIAEGCSNRCAYCVIPSLRGNYRSRRMEDILEE
ARALAEDGVQECIVIAQDITRYGVDLYGERRLPELLRELCRLPFHWVRLHYLYPDNLSDQ
LIDTIAGEAKICNYLDIPIQHCNDTVLKAMRRRETKAGLEELFRRVRERIPGVVLRTSLI
TGLPYEDEAAFEELCDFLGEQKLQRVGAFPYSPEEGTPAARMLNRVDTEEAQRRAELVME
IQTQVMDEFNDSRMGDTVEVLCDGYDVQAMSYVGRSYAESPGIDGCIFFTAERDVEPGDF
VMVRITGAMDGDLTGEAVEELSEEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtatcatttatatccctgggctgcgacaaaaaccgggtgaacaccgagcagatg
atggccctgtgcctgcaggccggacataccgtgcaggaggattgctccggcagcgacgtg
gtggtcatcaacacctgcggcttcatcgacagcgccaagagcgaggccatcgataccatt
ctggcggcggcggagctgaaggccgccggtgaggtgggcaaaattctggtaacgggctgt
ctcagccagcggtatcaggcggacattctggaggagctgccggagatcgacggcatcatg
gggaccggctgcttcggtgacatcgtcacggcgctggagcaggtggtgaacggtcaggag
tgccgccattttgccgacatcaacggccccgtggaggagctgccccgtgtgttgtccacc
ccccggcagtacgcctatctccgcattgctgaggggtgcagcaaccgctgcgcctactgc
gtgatcccctccctgcggggaaactaccgcagccgccggatggaggacattctggaggag
gcccgtgcgctggcggaggacggggtgcaggagtgcatcgtcatcgctcaggatatcacc
cgctacggcgtggatctgtacggagagcggcggcttccggagctgctgcgggagctgtgc
aggcttcccttccactgggtgcggctccactatctctacccagacaatctctccgaccag
ctcattgacaccatcgccggggaggcaaagatctgcaactatctggatatccctatccag
cactgcaacgacaccgttctcaaggccatgcgccgccgggagaccaaggccgggctggag
gagctgttccgccgggtgcgggagcgcatccccggcgtggtgctgcggaccagcctcatc
acgggactgccctatgaggacgaggcggccttcgaggagctgtgcgactttttgggcgag
cagaagctccagcgggtgggggccttcccctactctccggaggagggaactccggcggcc
agaatgctgaaccgggtggacaccgaggaggcccagcgccgggcggagctggtaatggag
attcaaacacaggtcatggacgagttcaacgacagccgcatgggcgacaccgtggaggtg
ctgtgcgacggctatgacgttcaggccatgagctatgtgggccgcagctacgccgagagc
cccggcatcgacgggtgcatcttctttacggcggagcgggatgtggagcccggagacttt
gtcatggtgcgtatcaccggcgccatggacggcgacctcaccggcgaagcggtagaggaa
ctttctgaggaggaataa
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