Vescimonas coprocola: MM50RIKEN_03400
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Entry
MM50RIKEN_03400 CDS
T07634
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00900
Terpenoid backbone biosynthesis
vcop01100
Metabolic pathways
vcop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MM50RIKEN_03400
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vcop01006
]
MM50RIKEN_03400
Enzymes [BR:
vcop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MM50RIKEN_03400
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MM50RIKEN_03400
2.5.1.29 geranylgeranyl diphosphate synthase
MM50RIKEN_03400
Prenyltransferases [BR:
vcop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MM50RIKEN_03400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCK80577
UniProt:
A0A810Q2V1
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All DBs
Position
351396..352265
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AA seq
289 aa
AA seq
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MDFYTRYAAYQAAIEQYLEGLFSTDKPYGRLQEAMRYSLLGGGKRIRPVLTLELARLGGI
DWHLALPYACALELVHTYSLIHDDLPCMDDDDLRRGKPTCHKAYGETLAVLAGDALQPEA
FRLIAEAPCMSAESRVEAIRVLSHAAGADGMVAGQVIDTLCGVSTQQELTGMYRLKTGVM
ISAAAELGCVASGMPATMRQQAIAFADKLGLAFQIRDDMLDVVGDEAVFGKPIGSDREEG
KVTFVDVLGLEGCRTAVEECTRRAEEAIFPWPDHDFLLTLAHSLEERKK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttttacacccgatatgccgcctatcaggcggccattgaacagtatctggaggga
cttttctccacggataagccctatggaagattgcaggaggccatgcggtacagccttctg
ggcggcggcaagcgcatccgcccggtgctgacgctggagctggcccgtttgggtgggata
gactggcatctggctctgccctatgcctgtgcgctggagctggtccacacctactccctc
attcacgacgacctgccctgtatggatgacgacgacctgcggcggggaaagcctacctgc
cataaggcctacggcgagacgctggcggtgctggcgggggatgccctccagccggaggcc
tttcggcttattgccgaggccccctgtatgtcggcagagagccgagtggaggccatccgg
gtgctgtcccacgccgccggcgccgacggtatggtggccggtcaggtgatcgataccctg
tgcggtgtatccacccaacaggagctgacggggatgtaccggctgaaaaccggggtcatg
atctcggcggcggcggaattgggctgcgtggcgtcggggatgccggcgaccatgcggcag
caggccatcgcctttgccgacaagctgggcttggccttccagatccgggacgatatgctg
gatgtggtgggcgacgaggccgtgttcggcaagcccatcggctccgatcgagaggagggg
aaggtcaccttcgtggacgtgctggggctggagggctgccgcacggccgtggaggagtgt
acccgccgggccgaggaggccatcttcccgtggccggatcacgacttcctactgacgctg
gctcactcgctggaggagagaaagaagtaa
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