Vibrio cholerae O1 2012EL-2176: EN18_03555
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Entry
EN18_03555 CDS
T03389
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq00330
Arginine and proline metabolism
vcq00480
Glutathione metabolism
vcq01100
Metabolic pathways
vcq01110
Biosynthesis of secondary metabolites
vcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
EN18_03555
09106 Metabolism of other amino acids
00480 Glutathione metabolism
EN18_03555
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EN18_03555
Enzymes [BR:
vcq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
EN18_03555
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIT31884
UniProt:
A0A0H6C2S8
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Position
2:complement(714954..717116)
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AA seq
720 aa
AA seq
DB search
MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacaacccaacgt
gaagtggtggatgtactgaaaaccgacttctgtgacattggtgcggcggtggtttccgtc
gaagacgtacaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgccgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgtg
cgtcgttatcaagaaagtttgttgccacctttctttggtacattgaaaaaatacgtggac
atgggtaactccacttttgcttgcccaggccatcaaggtggtcagttcttccgtaagcac
ccggttggtcgccagttttttgatttctttggtgaaaccttgttccgctctgatatgtgt
aacgcggacgtacgtttgggcgacttgctgatccatgaaggtgcaccgcatgatgcacag
gcttacgccgcgaaagtgtacaacgcggataaaacctacttcgtacttaacgggacttca
gcttccaacaaagtggtgtgtaacgccctgctgacaccgggagatctggtgctgtttgat
cgcaacaaccataaatccaaccaccacggtgcgttaattcaagcgggtgcgacaccggtt
tacttagaaacggcgcgtaacccattcggttttatcggtgggattgatacgcactgcttt
aacgaatcttacctacgtgatgcggtacgtaatgtcgacccaagccgcgcggaagcgaaa
cgcccattccgtcttgccatcattcagcttggcacttacgacggtacgatttacaacgcg
cgtcaggtggtggatcgcatcggtcatttgtgtgactacatcctgtttgactcagcatgg
gtgggctatgaacagttcattcccatgatgaaagactgctcgccacttcttctcgatcta
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcaggtttc
tcgcaaacttcgcaaattcacaagaaagatcaccacatcaaaggccaagagcgttactgc
aaccataaacgctttaacaatgcctttatgctgcacgcttcaaccagcccattctacccg
ctgtttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtaaaaaccggtatcgaagcccgtaagcttctaatgaaaaaatgcaaa
tacatcaagccgttcattccaccaatgatcgaaggtaaaccttggcagtctcaccccacc
gagcaaattgccgatgatttacgtttctttgaatttgagccgggccagaaatggcatgcg
tttgaaggttacgagcatggtcagtatttcgttgacccttgtaagttcctgctgaccaca
ccggggattgacccagaaactggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactctatcctc
ttcctgctcaccccagccgaagatatggcgaagatgcagcatttagtggcacaaattgct
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccgggtgtgttgtgtgtggttccgggagaaatatggggcggttcagtacagcgttac
ttcctcgctctagaagaaggcattaacttgctgccgggttttgcgcctgaattgcaaggg
gtgtatttggagccgacaggcgagggacgagtgcaagccatgggctatgtactgaaacgt
taa
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