Vibrio cholerae O1 O395: VC395_0043
Help
Entry
VC395_0043 CDS
T02099
Name
(GenBank) HD-GYP/EAL family protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC395_0043
Enzymes [BR:
vcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VC395_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDOD
EAL
DUF4327
Motif
Other DBs
NCBI-ProteinID:
ACP08071
LinkDB
All DBs
Position
I:complement(44015..45313)
Genome browser
AA seq
432 aa
AA seq
DB search
MVRCLWAAECCWLPPKRKQPFEDTMYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEY
MDADRATYRLIVENFLSLGTNPRIARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQ
PTDDLFEAVQELSQRGYLLALDDFVYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRL
AQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREV
CQPEVDYVRVERLVAQDIALSYKLLRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSL
AVASYISSKKPKELYNLSLQRAQFCQLMATHTHFKAHREQAFLIGMFSVLDALLDTSIEQ
LVEQLPLADDVKLALREREGPLGTLLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIE
AQRWSQDINRLI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
ttggttcgatgtttatgggctgcggaatgctgttggctaccgccaaagcgtaagcaaccc
tttgaggacaccatgtacacaacttatgtagcacgccaaccgatattgaatgcaaagcga
cacacgctaggttatgagctgctgtttcgagatggagaaaaaaacgcgtttcctgagtac
atggatgccgatcgtgctacctaccgtctgattgttgaaaactttttatcccttggtacc
aacccgagaattgcccgctcgcgctgttttatcaactttccccataaaagcttaattcga
cgtttgccgctgactctgccgcgtgagcagatcgtggtagaaattttggaaacgtgccaa
ccgaccgatgatctttttgaggcggtacaagagctgagtcagcgaggttatctgctcgcg
ttagatgattttgtgtattcacccgcttgggagcgctttttaccctacgtacagatagtc
aaaatcgacatcatggcaatggggctcgataaagcgtgtgaatttgtgcgtggtcgactg
gctcagggaagtcgtcgccgatttttggcagaacgagtcgaaaccgaagatgagtttcat
caagcgcgtcatgcgggttttaccttcttccaaggctattttttcagtaagccagaaatc
attaaacagcgctacgtcagtccagagcatgtgattgccatgcagctgtttcgcgaagtc
tgtcagcctgaagtcgattatgtgcgagtagagcgcttggtcgcgcaggacattgcgctc
tcctacaagctgctgcgtttcgtaaacactatgtcggatcggatctcggtctccatctcc
tcatttcgccaagccttggtttatcttggacaggacaaactgcgcattttcgtctctttg
gcggtcgcgtcttatatctcctccaaaaagcccaaggagctttacaacttgtcgttacaa
agagcgcagttttgccagttgatggcgacgcatacacattttaaagcgcatcgtgaacaa
gcgtttctgattggcatgttttctgtgctggatgccttgctcgatacctcaattgagcaa
ttggtggagcaactgccgctggccgatgatgtgaagttagcactgcgagagcgtgaaggg
ccactgggtactttgctcgatcttgaggaatgttttgaaaaagccgattggcaaggtgtg
gagcagcactgcctagaactgggttttgatctggaagatgtccgtcaggaattgattgaa
gcccagcgttggagccaggacatcaatcgattaatttag
DBGET
integrated database retrieval system
