Vibrio crassostreae: IS519_09495
Help
Entry
IS519_09495 CDS
T08776
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00540
Lipopolysaccharide biosynthesis
vcra01100
Metabolic pathways
vcra01250
Biosynthesis of nucleotide sugars
Module
vcra_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IS519_09495 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
IS519_09495 (rfaD)
Enzymes [BR:
vcra01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IS519_09495 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
Core region
IS519_09495 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
Phage_T7_Capsid
KR
adh_short
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UPR28449
LinkDB
All DBs
Position
1:2135912..2136853
Genome browser
AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDAGHNDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQV
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCVEREIPFLYASSAATY
GETDTFIEEKEYEGALNVYGYSKQQFDNYVRRLQADAAAHNETLPQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQMNAGENPKLFAGSETFQRDFVYVGDVAAVNLWFLENGVSGIFNL
GTGSAESFDEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVVFKTV
AQGVAEYMALQNK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggtggtgctggcatgatcggcagcaatattgtgaaagcactcaat
gacgcaggccacaacgatattctagttgtcgacaacctcaagaacggtaaaaagttcaag
aaccttgtagacctagacatcactgactacatggatcgcgacgacttcctaactcaagtt
atggctggcgatgatttcggccctattgaagctattttccatgaaggtgcgtgctcagct
accactgagtgggatggcaaatacatgatgcttaacaattatgagtactcaaaagagtta
ctgcattactgtgttgagcgtgaaatccccttcctatatgcctcttctgctgcgacttac
ggtgagacagatactttcatcgaagaaaaagagtacgaaggtgcattgaacgtgtacggt
tactctaaacagcagtttgataactatgttcgccgcctacaagcagacgctgcggctcac
aacgagacactgcctcaaatcactggtttccgttatttcaatgtttacggaccgcgtgaa
gatcacaaaggcagcatggcctctgttgctttccacctaaacaaccaaatgaacgccggt
gagaaccctaaactgttcgcaggtagcgaaacattccagcgtgattttgtgtatgtcggt
gatgttgcagcagtaaacctgtggttcttagaaaatggtgtttctggcatctttaaccta
ggcaccggcagtgctgagtcttttgacgaagttgccaaagcggtaattaagcaccatggt
aaaggcgaaatcgaaacgattcctttccctgagcatttaaaaggcgcttaccaagagttt
actcaagctgacctgacaaagcttcgagcagcaggctgtgatgtggtatttaaaaccgta
gcgcaaggcgtggcggagtatatggcacttcaaaacaaataa
DBGET
integrated database retrieval system
