Vibrio crassostreae: IS519_10775
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Entry
IS519_10775 CDS
T08776
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00130
Ubiquinone and other terpenoid-quinone biosynthesis
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01240
Biosynthesis of cofactors
Module
vcra_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
IS519_10775 (ubiD)
Enzymes [BR:
vcra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
IS519_10775 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
UPR28676
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Position
1:2405783..2407624
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AA seq
613 aa
AA seq
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MSFKDLRDFIDHLESIGQLKRISHPVDPDYEMTEISDRTLRAGGPALLFENPVGYDMPVL
TNLFGTPNRVAIGMGRQEVKELREVGKLLAYLKEPEPPKGFKDALDKLPVFKQVLNMPAK
RLRKAACQQVVWQGDDVDLDKIPVMSCWADDVAPLLTWGLTVTRGPNKKRQNLGIYRQQK
IGKNKIIMRWLAHRGGALDLRDWMEANPGKPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSISNDLEVPASAEIVMEGYIDPNEFADEGPYGDHTGYYNEKEKHHV
FTITHVTMRENPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCDEDVNARDWSQVTAAMCEHMEP
SRDSLMIENTPIDSLDFASPVVGLGSKMGLDITKKWDAELALSPDVQTAPVNSEHIEGSL
AELTKVHPEIIDIHLQNDNASMVVVSIDKQAAGNGKKIMEAVWSQFDENKFVIVCDGDVN
VSDWNDIIWAVTTRMDPARDTLFLQNETGHSKMGLDATNKWEGECLREWGVPITKDPDVV
KKIDSIWEQLGIS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaagatttacgtgattttatcgaccatcttgaaagtattggtcagttgaaa
cgcatttctcacccagtcgatccagactacgaaatgaccgagattagcgaccgtactcta
cgtgctggtggcccggctcttttgtttgaaaatccagtaggctatgacatgcctgttttg
accaacctatttggtacacccaaccgtgttgctattggtatgggtcgtcaagaagtcaaa
gaactgcgtgaagtgggcaagttgcttgcttacctaaaagaacctgagccaccaaaaggc
tttaaagacgctcttgataaactgcctgtatttaagcaagtcttaaatatgccggctaaa
cgccttcgcaaagcggcttgccaacaagtggtatggcaaggcgatgacgtcgacctagat
aaaatcccggtgatgagctgttgggctgacgatgtcgcgccattgctaacatggggttta
acggttactcgtggtccaaacaagaaacgccaaaacttaggcatctatcgtcaacagaag
atcggcaagaataaaatcatcatgcgttggttagcccaccgtggtggagcgcttgatctg
cgtgattggatggaagccaacccagggaagccattcccagtatcggtagcgtttggtgct
gaccctgccaccattcttggagcagttacgccagtgccggatactttatctgagtacgcg
tttgcaggcttactacgtggtagtaaaactgaggtcgttaaatcaatcagtaacgattta
gaagttcctgcaagtgctgaaatcgtgatggaaggttacatcgacccgaatgaattcgcg
gatgaagggccttacggagatcatactggttactacaacgagaaagaaaagcaccatgtg
tttactattactcatgtaaccatgcgcgagaaccctatctatcacagcacctatactggc
cgtccacctgatgagcctgcggtattgggtgttgcgctcaatgaagtgtttgtgcctatt
cttcaaaagcagttcccagagattgaagatttctatctaccgcctgaaggttgttcgtac
cgaatggcagtagtgaccatgaagaagcaatacccaggtcacgctaagcgagtcatgatg
ggtgtatggtctttcttacgccaattcatgtacaccaaatttgtattggtgtgcgatgaa
gatgtgaatgcacgcgattggtctcaagtaaccgcagcgatgtgcgaacatatggagccg
tcacgcgatagcctgatgatagagaacacgccgatcgattcattggattttgcctcaccc
gtggttgggttgggttctaagatgggtctagatatcactaagaagtgggacgcagagtta
gcgttatcgccagatgtccaaacagcacctgtaaatagtgaacatatagaaggtagcttg
gctgagttaaccaaggttcatcctgaaattattgatattcacctgcaaaacgacaatgcc
agcatggttgtggtgtctattgataagcaagctgccggtaatggtaagaaaatcatggaa
gcggtttggtctcaatttgatgagaacaagtttgttatcgtgtgtgacggcgatgtaaat
gtgagtgattggaatgacatcatttgggcggtaacgaccagaatggatccggcgagagat
acgttattcctacagaatgaaactggacactcaaaaatgggcctcgatgcgaccaataag
tgggaaggtgaatgcctgcgtgagtggggtgtaccaatcacaaaagatcctgatgtcgtg
aaaaagattgatagcatctgggaacagctaggaatttcatga
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