KEGG   Vibrio crassostreae: IS519_14170
Entry
IS519_14170       CDS       T08776                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vcra  Vibrio crassostreae
Pathway
vcra00740  Riboflavin metabolism
vcra01100  Metabolic pathways
vcra01110  Biosynthesis of secondary metabolites
vcra01240  Biosynthesis of cofactors
vcra02024  Quorum sensing
Module
vcra_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vcra00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    IS519_14170 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IS519_14170 (ribD)
Enzymes [BR:vcra01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     IS519_14170 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     IS519_14170 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UPR29264
LinkDB
Position
1:3127173..3128249
AA seq 358 aa
MMSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMAGDKAK
GATAYVTLEPCSHYGRTPPCAEGLIKAQVSKVICAMQDPNPKVAGRGIKMLRDAGIEVEI
GLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQNYR
AKSGAVLSTSQTVIEDNASLNVRWAELPSSIKAHYAEDELRQPIRVILDRQNQLRPELKL
FQTPTSVLRVAEASADIKVATTDAGQLDLHDLMRQLPANHIDHIWVEAGATLAKSLIEEQ
LVDELILYLAPKLMGSDGRGLMGALGLTSMSDVIDLEIKDVRQVGVDIRIVAKPVFRN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgatgtcgcgtgctattcaattagcgaaacgcggcatttacactactgcacccaacccg
aatgtgggttgtgtcattgtacaaaccgacggtcagatcgttggcgaaggttttcatgcc
aaagctggcgagcctcatgctgaagtacatgccatgcgaatggcgggcgataaggccaaa
ggtgcgacggcttatgtcacgctagagccttgttctcattacggtcgaacgccaccttgt
gcagaaggtttgattaaggctcaagtttcaaaagtgatttgcgccatgcaggacccaaac
ccaaaagtcgcaggtcgtggtatcaaaatgttacgcgatgcgggtattgaggttgaaatc
ggtttgttagagcaagacgctctcgacttgaaccctgcatttatcaagcgtatgcaaact
ggcatgccattcgttcagttaaagatggccgctagccttgatgggcaaacggcattggaa
aatggtcaaagccagtggatcacatcgccagaagcgcgtcgtgatgttcagaactaccga
gcaaaatcaggcgctgtgttatcaactagccagacggtgattgaagacaacgcgtcgttg
aatgttcgttgggcagaattgccaagcagcatcaaagctcattacgctgaagacgagctg
cgtcagccgattcgcgtgattcttgatcgtcaaaaccaactgcgtcctgaactcaagtta
ttccagactccaacatccgtgttgagagtagcggaagcgtctgctgatattaaagtcgca
accacagatgcaggtcagctcgatttgcacgatctgatgcgtcaattacctgcgaatcat
atcgaccatatttgggtcgaagcgggcgcaacattggcaaaaagcttgattgaagaacag
ctggtggatgagctaatcctctatttagcacctaaacttatgggcagtgacggacgaggt
ttgatgggcgcattagggctcacttcaatgtctgacgttattgacctagaaattaaagat
gttcgacaggttggtgtggatattcgcatcgttgcgaaacccgtatttcgaaactga

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