Vibrio crassostreae: IS519_14230
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Entry
IS519_14230 CDS
T08776
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00730
Thiamine metabolism
vcra01100
Metabolic pathways
vcra01240
Biosynthesis of cofactors
vcra04122
Sulfur relay system
Module
vcra_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
IS519_14230 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
IS519_14230 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcra03016
]
IS519_14230 (thiI)
Enzymes [BR:
vcra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
IS519_14230 (thiI)
Transfer RNA biogenesis [BR:
vcra03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
IS519_14230 (thiI)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
NAD_synthase
Y_phosphatase3
SmaI
Motif
Other DBs
NCBI-ProteinID:
UPR29275
LinkDB
All DBs
Position
1:3138558..3140006
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AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTRILECNIRNVIQRRCESVAVFNRRDHIEVTSESDQYY
AEVLEALTHTPGIHHSLEVQQSEFKDLHDIYEQVLERSRADIEGKTFSVRAKRRGKHDFT
SIELERYVGGGLNQAVESAKVRLKNPDVTVKVEVANDKLNQVLARHKGLGGFPLGTQEDL
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVAHYLWNKYGSSAKVKFI
SVDFEPVVAEILENVEDGQMGVVLKRMFMRAGGMVAERFGIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIIDLSRIIGTEDFAKVMPEYCGVISKKPTVKAKKGKL
EAEEAKFNFEVLDQVIENARVMDIRDIEKESQEQAPEVEQVQAVAEHAIVLDIRSPEEED
ESPLEIEGVEIKHIPFFKLSTQFGDLDQAKEYLLYCDRGVMSRLQALYLQEQGFHNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagccccatccggaaatttttgtaaaaagtgaatcggtgcgtaag
cgcttcacaaggattctagagtgcaacattcgtaacgttattcaacgtcgctgtgaaagt
gttgcggtattcaaccgtcgcgatcatatcgaggtgacgtctgagagtgaccagtactac
gcagaagtgttagaggctctgactcacactccaggtattcaccactctcttgaagtacaa
cagtctgagttcaaagacttgcacgatatttacgagcaagtactagaacgcagccgtgct
gacattgaaggcaagactttctctgttcgtgctaagcgtcgtggtaagcatgactttacc
tctattgaacttgaacgctacgtaggcggcggtctaaaccaagcggttgagtcagctaaa
gttcgacttaagaaccctgatgtaaccgttaaggttgaagtggctaacgataagctaaac
caagttctagctcgtcacaaaggcctaggtggtttccctcttggtactcaagaagatcta
ctgagcttgatctctggcggctttgattctggtgtttcaagctacctgcacatcaaacgt
ggctctaaggttcactactgtttcttcaaccttggtggcccagcgcacgagattggcgtt
aagcaagtagctcactacctatggaataaatacggctcatctgcaaaggtgaagttcatt
tctgtggactttgaacctgtggttgctgaaatccttgagaacgtagaagacggccaaatg
ggcgttgttcttaagcgtatgttcatgcgtgcgggtggtatggttgcagagcgcttcggt
attgaagctctagtaacgggtgaagcacttggtcaggtttctagccaaacgctcactaac
cttcgccacatcgacaacgtgactgatactttgattcttcgtccgcttatcaactgggac
aaagaagacatcatcgacctttctcgtatcatcggtactgaagacttcgctaaagtaatg
cctgagtactgtggtgttatctctaagaagccaacagtgaaagcgaagaaaggtaaactg
gaagcagaagaagctaagtttaactttgaagtgctggatcaagtgatcgagaacgctcgt
gttatggatatccgtgacatcgagaaagagagccaagagcaagcgcctgaagttgaacaa
gttcaagctgttgctgagcacgctatcgttcttgatatccgtagcccagaagaagaagac
gaaagcccactagagatcgagggtgttgaaattaaacacatcccattcttcaagctttcg
actcagtttggcgacctagaccaagcgaaagagtacttgctgtactgtgaccgtggtgta
atgagccgtctacaggcactttacctacaagagcaaggcttccataacgttaaggtttac
cgcccatag
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