Vespa crabro (European hornet): 124428487
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Entry
124428487 CDS
T09462
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124428487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124428487
Enzymes [BR:
vcrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124428487
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124428487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124428487
NCBI-ProteinID:
XP_046828532
EnsemblRapid:
ENSVCRG00010003102
LinkDB
All DBs
Position
12:complement(6491635..6497802)
Genome browser
AA seq
1708 aa
AA seq
DB search
MQKYQKNRSSPKHLDPKCLTFSIFTTEDVINLSVIKIRTPLSFNILGHPLKGGLYDPALG
PLLESSDPCATCGSTVFKCPGHFGHIELPMPVVNPLFHKALSMLIKLSCLNCFTLQIPTH
IKMLLCGKLKILEMGLLSDIDGLEDEITSAKTKSQDIHESDLVYIKDIIETYIRNLVNKA
RHLPSSRTNGIHLNTKNVNAQWHLYVDSVLKQYNAGKICINCQEAIPKITILRNKIMTTK
VNDANFATTNIKSHKVVNKLETIIVMPDQSKEYLRKLWVNEKEFLKVIIPCLNNVNTEYA
TDVFFFDVVPVLPPIVRPINFLHGQMIEHPQSQVYKSIIQDCLILRNIIQSIQDGNTSRL
PEEGRMVFEQIKGGTPVEKLHNAWQTLQTDIDHLMDRELNKTPDSANCHGLKQVIEKKEG
IIRMHMMGKRVNYAARSVITPDPNLDIDEIGIPETFALKLTYPIPVTPWNLLELRQLVLN
GPNIHPGAVIIENEDGSVQRLNPYDITKREAIAKRLLPSSDKANRFFNGIKIVHRHLQNG
DMLLVNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDECNVHFPQNELAR
SEGYLIANVSNQYLVPKDGTPLSGLIQDHVISGVRLTMRGKFFCRTDYMQLLYCALVGHK
GDLKLLPPTILKPFPLWSGKQIISSILINITPPNTALINLKSRAKISVKQWQRRASRRWK
CGGKEFKYPEEMSEAEVIVRNGELLCGVLDKTHYGATPYGLVHCVYELYGGPCSSKLLSA
LGKLFQAFLQRDGFTLGIEDILIVPRADVKRKEIISECRKLGEDVQRAILDMPDDTPTDV
ILSRAEESYRTEPKFRAQVDRKYKNVLDVYTNDINRTCLPAGLLKKFPHNNLQLMVLSGA
KGSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFSPYDPSPRAGGFVDGRFMTGIKPQ
EFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVDYDSTVRDSDGSLIQIYYGED
GLDVTASTFLKKDHMDFLVDNKNVIVDPNLVTYLKEETNYQSTLRSIRKIKKWTKKNDGG
TLSKVRRNEFSIFTADNYNPASSKFKRIDENSGRSKGTLSLIRKWIRMDEETKKSYKKQC
IRCPDPLTSKLRQDIEFGVLSERLEMLMDDYVTSDNKSFDMSFATAMDKAELRDLLSMKV
MKSICPPGEPVGLLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLREILMMASRTIK
TPTMEIPFKKDLQNLTKRSNKLRQKLTKCIMTDVLKDIRIDKEMEHFPHRRLLHTLHIQF
LPHKCYKSEFSVSPQGIIEKTEQIFFKALFKEIKKIAKVTGTLIHVEDEKKRGNNEDKEL
DEEEMDDEPKKPSKLTNVRRDLGEQHESSDEEEAAEDADATLTRTISRHQENQEYEGDTE
DEVEDGNEKDDDDDIKEMMPPRESSNNDVEERDDDDDWSLGRGYDANDKHKKCNNDIVNA
YTYALEYECDQAKSLWCRLKFWLPLKMTKIDLPTIIRNVAGKVILWETPDIRRAFTIESS
DGETILKTDGINIIEMFKYNEILDLPRLYSNDIYGISQTYGIEAANKVIIREVKDVFKMY
GITVDSRHLSLIADYMTFDGTFQPLSRKGMNDSASPLQQMSFESSLNFLRNAILQRKQDD
LKSPSGRLMLGQPCRSGTGACSLLTKIL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatcagaaaaatcgctcgagtccgaaacacttggatccaaaatgcctgacg
ttttcgatttttacgacggaagacgtgataaatttaagcgttataaagattagaactcct
ctctcgtttaatatattgggccatccattgaaaggtggtttgtacgatccagcattagga
cctttgctcgagagctcagacccttgtgcaacatgcggctccacggtattcaagtgccct
ggccattttggccatatagaattacccatgccagttgtcaatccattatttcacaaagca
ttgtccatgctgataaagttatcctgcctaaactgtttcacactacaaattccaacacat
ataaagatgttattgtgcggaaaactaaagatcctagaaatgggattactgagcgacata
gacggtttggaagatgaaataacgtccgccaaaacaaaatcccaagatatacacgaatct
gatctggtatatattaaagacataatagaaacatatataaggaatcttgtcaacaaagca
agacatttgcctagcagtcgtaccaatggaattcacttaaatacaaaaaatgtcaatgcc
caatggcatttgtacgtggatagcgtcctaaagcaatataacgccggaaaaatatgtata
aattgtcaggaagctataccaaagattactattttaaggaataagattatgacgactaaa
gtcaatgatgccaattttgctacgactaatataaagtcgcacaaggtagtaaataaattg
gaaacaataatcgtaatgccggaccaatcgaaggaatatttgcgaaagttgtgggtaaat
gagaaagaatttcttaaagttatcattccttgcttgaataacgtaaataccgagtacgcg
accgacgtattctttttcgacgtagtgcccgttttgccgcccatagtaaggcccataaat
tttcttcacgggcaaatgatcgaacatccacagagtcaagtttacaaaagtatcatacaa
gattgtttaattcttaggaacatcatacagtctatacaggacggtaacacgagtcggcta
ccggaggaaggaaggatggtttttgaacaaataaagggaggtacgcccgtagaaaagctc
cacaatgcttggcagacgttacaaaccgatatagatcacttaatggatagagaattgaat
aagaccccggattctgcgaattgtcacggtttgaagcaggtcattgaaaaaaaggaaggg
atcataaggatgcacatgatgggtaaaagggtgaattatgcggcacgttcggtcattacg
cccgatccaaatttggacatcgacgagattggcatccccgagaccttcgcgctgaaattg
acctaccctataccggtaacaccctggaatctactcgagttacggcaattggtattgaac
ggtccaaatattcatccaggagcagttataatagaaaacgaagatggttctgtgcaacgt
ctcaatccgtacgacataaccaagagggaagccatagcgaaacgtttattgccgagcagt
gacaaggccaatcgtttctttaacggcattaaaattgtccataggcacttgcaaaacggc
gatatgcttttggtaaatcgtcaaccgacgttgcacaagcctagcataatggcgcacaag
gcgcgcatattgaaaggcgagaaaacattgcgccttcattacgccaattgtaaggcctac
aatgcggacttcgatggcgacgagtgtaacgttcactttccgcaaaatgaattggcaaga
agcgagggatatttaattgctaacgtatcgaatcaatatctcgtaccaaaggacggtacc
ccattgagcggactcatacaagatcatgtaatatccggtgtacgtttgacaatgcgaggt
aaattcttttgtcgtaccgattacatgcaattgctctattgcgccttggtagggcacaaa
ggcgatttgaaattattaccgcctacgatattgaagcctttcccattatggtcgggcaag
caaataatatcgagcatacttattaatattacacccccgaataccgcgcttattaattta
aagtcaagggcaaagattagcgttaaacaatggcaaagacgggcgtcacgacggtggaag
tgcggcggtaaggaattcaaatatcccgaagaaatgtcggaggcagaggtaatcgtaaga
aacggcgagctcctttgcggcgtactcgataagacccattacggcgcaactccttacggt
ctggtacattgcgtttatgaattgtacggaggtccgtgctctagcaaattgttaagcgct
cttggcaaactctttcaggcatttttacaaagggacggatttactctcggcatcgaggat
attttaatagttccgagagcggacgtcaaacgcaaagagatcatttcggaatgtagaaaa
ttgggagaggatgtgcaaagggccatattggacatgcctgacgatacgccgacggatgtg
atattgtctagggcggaagagtcgtatagaacggaaccgaaatttcgtgcgcaggttgac
aggaagtacaaaaatgtattggacgtttacacgaacgatattaacaggacttgcttgccg
gcgggtcttttgaaaaagttcccccacaataatttacaattgatggtactatcgggtgcc
aaagggtctatggtgaatactatgcaaatttcctgtttgctcggtcaaatagaattggaa
ggtaaaagaccgccgttaatgataagcggcaaaagtttaccgagtttttccccgtatgat
ccgtcccctagggccggaggattcgtagatggacgtttcatgaccggaataaaacctcaa
gaattctttttccattgcatggccggtagggagggcttgatcgataccgcggtaaagaca
agtagatctggttacctccaaaggtgtcttataaagcatttagagggtttggttgttgat
tacgattcgacggtaagagattccgacggtagcttaatacaaatttattacggcgaggat
ggcctcgatgtgacagcttcgacgttcctgaagaaggaccatatggatttcttggtggat
aataaaaatgtcatcgtcgatccgaatctggtgacgtatttgaaggaggagacaaattat
caatccactttgagatcgataaggaaaataaagaaatggacgaagaaaaatgacggtggg
acgttgagtaaagtaaggagaaacgaattttcgatatttaccgcagacaattataatcct
gcaagttcgaaattcaaacgtatcgacgagaacagcggaagaagtaaagggacgctatcg
ctgataaggaaatggataagaatggacgaggagacgaaaaagtcatataaaaagcaatgc
atcagatgtccagatcctttgacgtcgaaattaaggcaggacatagagtttggcgtactt
tccgaaagattggagatgctgatggacgactacgtaacgtcggacaacaagtcgtttgat
atgagttttgcaacggctatggataaggccgaattgagagatcttttgtcaatgaaggta
atgaaatcgatatgcccgccgggcgaacccgttggtttgttagcggcacaatcgatagga
gagccatcgacgcaaatgacgctcaatacgttccaccacgcgggtcgcggcgaaatgaac
gttaccttgggtattccaagattacgcgagatattgatgatggcctcgagaaccataaag
accccgacgatggagataccttttaagaaggatttgcaaaatcttaccaaacgatcgaat
aaattgcgacaaaaattgacaaagtgcattatgactgacgttttgaaggatattagaatc
gacaaggagatggaacattttcctcatcgacgtttgcttcacaccttgcatattcaattt
ttacctcacaaatgttacaaaagtgaattttccgtgagcccacagggtataatagaaaag
accgaacaaatctttttcaaagcattgttcaaggaaataaaaaagattgccaaggtaact
ggcaccttgatacacgtcgaagatgagaagaaacgagggaacaacgaagataaagaattg
gacgaagaggagatggatgacgaaccgaagaagccgtccaaattgacgaacgttagaaga
gatttgggagagcaacacgagtcgtccgacgaggaggaagccgcggaagatgctgatgcg
acgttgactcggacgatatcgcgtcatcaagaaaatcaggagtacgagggcgataccgag
gacgaggtggaggatggaaatgaaaaggacgatgacgatgatatcaaagagatgatgccg
cctcgtgaatcgagcaacaacgacgtggaagagagggatgacgatgacgattggtcttta
ggaaggggctatgatgcgaacgacaaacacaagaaatgtaataatgatatagtcaatgct
tatacgtatgcactggaatacgaatgtgaccaagcaaaatcgttgtggtgcagattaaaa
ttctggttgccgcttaagatgaccaagatagacttgccaacgattattagaaatgttgct
ggcaaagtgatcctctgggagactcctgacataagaagagcttttacgatcgaaagttct
gacggagaaactattcttaaaaccgacggaataaatataatagaaatgttcaaatacaac
gagattttggacctccctagattatattccaacgatatctatggtatttctcaaacttat
ggtatcgaagctgccaacaaagtaataataagagaggtcaaagacgtattcaaaatgtat
ggaataacggtggactctaggcatctctctctaattgccgattacatgacattcgatggt
acatttcagcctctcagtcgtaaaggcatgaacgattctgcctcgcctttgcaacaaatg
agcttcgaaagttctctcaattttttgcgcaatgccatattacaaagaaagcaggacgat
ttaaagtcaccatccggtcgattgatgctaggtcaaccatgtagatcgggtacaggtgca
tgctctttattaacgaaaatactttag
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integrated database retrieval system
