Vibrio cholerae O1 El Tor MS6: MS6_2493
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Entry
MS6_2493 CDS
T03666
Name
(GenBank) sensory box/GGDEF family protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MS6_2493
Enzymes [BR:
vcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
MS6_2493
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
Motif
Other DBs
NCBI-ProteinID:
BAP04148
LinkDB
All DBs
Position
1:complement(2818089..2820578)
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AA seq
829 aa
AA seq
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MFTVSRLIPDLASANQVLETMDLPHGQSILVQIFSPLSREHVVQLARLIRSRHPQACLLG
CSTEEVIFQGEVHHQVTLLQITVFEQTYLSRAVVDYSDDEAADAERLARQLELTSMSRAV
VCFSWQMDTLQVARFALRDTQGAPVPVAGGAAKQTPSGRWVLLDEACYQNASVAIALHGE
ALYVETGGYTEWQPVGRTYRVTAVEGDRVLRLDDEPIEAIYQRNLGAQADLPHDWLISFP
LMKGECRHQDLYLPLGLAEEGGLRFNRPLALQDEVRFCFDHPSLTLERVYLTAQQLQAKQ
CQQVWVFNCALRLNFMHENHELQPLQAVAPTDGCYCWGELLYEHGQQQVMHHSMTFLALR
EGAVRDDLVPIPLPSYPEGMTSPLFNLIRHAFHDLDAMTDNLAQQIRAQTSLLTASYRRD
RRTGLPNRVVLRERLANFAANEHLIALKVTNFNQINEKYGYPVGDKLLRDLSEQFQVFLD
QKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSIS
LCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRV
SRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEIILPGNFLPIITDTHLYTRLSR
QMITHTFNMMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVADPARVGLEVLESEQIKD
YGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRI
AEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRLG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtctcgcgtctcatcccagatttagcatcggccaatcaggtgctcgaaacg
atggatcttcctcatgggcaatccatcttagtgcaaattttctctcctttgagtcgcgag
catgtcgtgcagcttgcgcggctcatccgtagtcgccatccacaagcttgcctgcttgga
tgcagtaccgaagaggtgattttccaaggggaagtgcaccatcaggtgacgttgctgcaa
atcaccgtgtttgagcaaacttatcttagccgtgctgttgtggattacagtgacgatgag
gctgccgacgcggagcgtttagctcgccagctcgagctcactagcatgtctcgagcagtg
gtctgtttttcttggcagatggataccttgcaagtcgcacgatttgccttacgcgacacg
cagggtgcgccagtgcccgtcgctggtggagccgccaaacaaactcccagtggtcgctgg
gttttgctcgatgaggcttgttatcaaaacgccagtgtggctattgcgctgcatggcgaa
gcgctttatgtcgagacgggtggttacactgagtggcagcctgttgggcgcacctatcgg
gtcacagccgtggagggagatcgggtcttacgtttggatgatgagccgatagaggcgatt
tatcagcgcaatttgggcgcgcaagccgacttaccccatgactggctgatcagttttcca
ctgatgaaaggggaatgccgccaccaagatctttatctgccgctcgggctggcggaggaa
ggcggactgaggtttaaccgcccactggcgctgcaagatgaagtgcgcttttgttttgat
cacccgagtttaaccctagagcgggtctatctcaccgcgcagcaactacaagccaagcag
tgccaacaagtgtgggtgtttaactgtgcgctgcgtttaaacttcatgcatgagaatcac
gagttacaaccgcttcaggcggtggcgccgaccgatggttgttactgttggggagagctg
ctgtatgagcatggtcagcagcaagtgatgcatcatagcatgacgtttcttgccttgcgt
gaaggggcggtgcgtgacgatcttgtcccaatccccttgccgagttatccggaagggatg
acgtcccctctgtttaatttgatccgccatgcgtttcatgatttggatgccatgacggac
aatttggcacagcagatccgcgctcaaacctcattactgacggcgagttaccggcgtgac
cgacgtaccggcttacccaatcgagtggtgttacgtgagcgattggcgaacttcgcggcc
aatgagcacctaatcgccctgaaagtgaccaacttcaatcagatcaatgagaagtacggt
tatccggtaggcgataagctgcttcgtgatttgagtgaacagtttcaggtctttttggat
cagaaattggcagggcagagcggtttgtatgcgattggggtcggtgagtgggcaacggtt
tttcgtgccaagctggacgggaaaagtattcatagccatttctatcagtttgtggagcag
ttggagcacgtcaacttcgagccctacggtttaccgaatgtggattatctgtcgatctcg
ttgtgcgctgggttagtcagtcagggcgattttgcagagcattcgccggatgagctattg
ctgcgtgctatcgaagcacgccgctacgcgtttaacaacaaccaccatttctgtaatgca
gcgcgtttaaaagtgcaagaaagtgttcgtcaggagcggctgaattggctatcgcgggtt
agccgcgcggtggtacgtgatgatgtggtggtttatgcgcagccgatttgtcaggcgcgt
agtcacattgtggcttcctacgaatgtttagtgcggattgaagatgaaggggaaattatc
ttgcctgggaattttctcccgatcatcaccgatactcacctctatactcgtttgagccgg
cagatgataacgcataccttcaatatgatgcgtcatcgcccggaggcgttttcgatcaat
ctttcaccgcaagatttgatgagtgagcgcaccttgcagcatttggaagcggcaatcaaa
tcggtggccgatcccgcccgtgtcgggctcgaagtgttggagagcgaacaaatcaaagat
tacgggcggatgattgaagtgtgtaaccatttccgcacactgggcgcgaccatcattgtc
gatgattttggcagtggttattccaatattgatgagatagtgaagcttgagccgcaggtg
attaagctcgatggcagcttgatccgcaatattgatcaggatgtgaagcagcgccggatt
gccgagcagctcgtgaaattgtgtcaggtactgaatgcgaaaaccgtggcggagtttgtc
cataaccagacggtttgtcgcatcagtgaagatatgggtgtggattatttacaaggctat
ttcttgggtcgaccttcacgcttgggttaa
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