Vibrio coralliilyticus OCN014: JV59_39640
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Entry
JV59_39640 CDS
T03497
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct03030
DNA replication
vct03410
Base excision repair
vct03420
Nucleotide excision repair
vct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JV59_39640
03410 Base excision repair
JV59_39640
03420 Nucleotide excision repair
JV59_39640
03440 Homologous recombination
JV59_39640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vct03032
]
JV59_39640
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_39640
Enzymes [BR:
vct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JV59_39640
DNA replication proteins [BR:
vct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JV59_39640
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JV59_39640
NER (nucleotide excision repair)
GGR (global genome repair) factors
JV59_39640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIU68309
LinkDB
All DBs
Position
1:3339713..3342508
Genome browser
AA seq
931 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASERIAV
VFDAKGKTFRDEMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAYQASQAGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGSLEKLYDNLDDIAPLGFRGSKTMAKKLVDNK
EEAFLSYELATIKLDVELEETPDSLLKAEPNTDELIKLYGQLVFKSWLNELLEGGTGVIV
ADEKSGAASGAGASATASEIDTSAVTIDRSQYETILDQQAFNTWLDKLKAADVFAFDTET
DSLDYMVANLVGVSFATEEGVAAYVPVAHDYLDAPEQLDRDWVLEQLKPILEDDAQAKVG
QNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAG
KGKKQLTFNQIELEQASPYAAEDADVTLRLHNRLLANIEQDEKLKTIYEEVEVPLVPVLS
RIERTGVLIDDMKLAAQSQEIALRLDELEQQAFEIAEQEFNMNSPKQLQAILFEKMGLPV
VKKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPETGRVHTS
YHQAVTATGRLSSTDPNLQNIPIRNDEGRRIRQAFIAPHGYKIMAVDYSQIELRIMAHLS
GDKALLDAFQQGKDIHAATAAEIIGVDIEQVSAEQRRRAKAVNFGLIYGMSAFGLAKQLG
IPRGEAQQYMDTYFERYPGVMQYMEDTRSAAAEQGYVETIFGRRLHLPEIKSRNGMRRKA
AERAAINAPMQGTAADIIKKAMLLVDEWIESQGQGRVKLLMQVHDELVFEVQESALAEIE
SKVQELMESAAQLDVPLIAEAGHGDNWDQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtattcctgacaacccgttgattttgattgacggctcttcttatctttaccgc
gcatttcatgcttatccgggcactatgagcaacggtgatatcccgacgaacgctgtttat
ggtgtggtaaacatgctacgcagtatgatgcgtcagtttgcctctgagcgtatcgcagtg
gtctttgatgctaagggaaaaaccttccgtgatgagatgtatccggaatacaaagccaac
cgtcctccgatgcctgatgatctccgttgtcagattgaacctctgcacaatgtgattcgc
gcaatgggtttgcctctgatctgtgttccgggtgtggaggcggatgatgtgattggtacg
ctcgcgtatcaggcttcacaagcggggatgccagtattgatcagtaccggcgataaagat
atggcgcagttggtggatgacaacgtgactctgatcaacaccatgaccaatgtggtgatg
gatcgagaaggcgtgattgaaaaatttggtatcccaccagagctgattatcgattatctc
gctttgatgggcgataaagttgataacatcccaggtgtaccgggtgttggtgataagacc
gcaactgcattactgcagggtatcggcagtttggagaagttgtacgacaatcttgatgac
atcgcaccgcttgggttccgtggctcgaagaccatggcgaaaaagctggtcgataacaaa
gaagaagcgtttctttcttacgagcttgccacgattaagttggatgttgagctggaagaa
acgccagactcactgctcaaggccgaaccgaataccgatgagctgatcaaactctatggc
cagttggtgttcaaatcttggctcaatgaattactggaaggtggcacgggtgtcatcgtg
gcagatgaaaagtccggtgcagcgtcgggggctggagcctctgccacagccagcgagatc
gatacctctgcagtgacgattgatcgcagccagtacgaaaccattcttgaccaacaggca
ttcaatacttggttagataaactcaaagcggcggatgtcttcgcgtttgataccgaaacc
gacagcctcgattacatggtggcgaatctggttggtgtgtcgtttgcgacagaagaaggc
gtcgctgcatacgtgcctgtggcgcatgattatcttgatgcgccagagcagcttgatcgc
gattgggtactagagcaattgaagccgattcttgaagatgatgctcaggcgaaagtgggg
cagaatctaaaatacgatgcgtcggtattggctcgctacggaattgagatgaaaggcatt
aagcatgacaccatgctcgcgtcatacgtttacaacagcgtgggtggcaagcatgatatg
gacagcctggcactgcgattccttcagcacagctgcatttcttttgagcagattgcgggt
aaaggcaagaagcagctgacgttcaatcagattgaactggaacaagcttcaccatacgcc
gcagaagatgctgatgtgaccctccgtttacacaatcgcttgctcgccaacattgagcag
gatgaaaagctgaagaccatctatgaagaggtcgaagtgccgctggttcccgttttatca
cgtattgaacgcacaggcgtattgattgatgacatgaagctggccgctcagtcgcaggaa
attgcgttgcgccttgatgagttggagcagcaagcgtttgaaatcgcggagcaagagttc
aacatgaattcgccaaagcagctgcaagcgattctgtttgagaaaatgggtctgccggtt
gtgaagaaaacgccatcgggaacgccttcaactaatgaagaggttctgcaggagttggcg
ttggattacccgttgccaaaattgatcctcgaatatcgtggcttagcgaagctcaaatca
acttatactgataagctgccgaaaatgattaatcctgaaacaggccgtgtccatacgtct
tatcatcaggctgtcaccgcgactggccgtttatcttcgactgatcctaacctacagaat
atcccaatccgtaatgatgaaggtcgacgtattcgccaggcgtttatcgctccacatggt
tacaagatcatggcggtcgattactcccagattgaattgcgcattatggcgcacctttca
ggagacaaagcgctgctagacgccttccagcaaggaaaagacattcatgcagcaactgcg
gctgaaatcattggtgtagacatagagcaggtgtcagctgaacaacgtcgtcgtgcgaaa
gcagtcaactttggccttatttatggcatgagtgcttttggtctggcgaagcagttgggc
attccacgtggcgaagcacagcaatacatggatacctactttgagcgctacccaggtgtg
atgcaatacatggaagacacccgcagcgctgcagctgaacaaggttatgtcgaaaccatc
tttggccgtcgtctgcatttgccagaaataaaatcacgcaacggcatgcgtcgtaaagcg
gcagaacgtgctgcgatcaacgctccaatgcaggggacagcagcggacatcatcaagaaa
gccatgttattggtggatgaatggattgagagccaaggtcagggtcgagtgaaattgctg
atgcaggtgcacgatgaactggtctttgaagttcaggagtcagctttagccgaaattgaa
agtaaagtacaagaattgatggaatccgccgctcagctggatgtacctttgattgcggaa
gcgggtcatggtgacaactgggatcaggcgcactag
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