Vibrio cholerae O49 1154-74: VAA049_118
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Entry
VAA049_118 CDS
T03828
Name
(GenBank) HDOD domain protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA049_118
Enzymes [BR:
vcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAA049_118
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Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
DUF4327
Motif
Other DBs
NCBI-ProteinID:
AKB01854
UniProt:
A0A0E4C3S5
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All DBs
Position
124047..125273
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AA seq
408 aa
AA seq
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MYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRI
ARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDF
VYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARH
AGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKL
LRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQF
CQLMATHPHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGPLGT
LLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIEAQRWSQDINRLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaacttatgtagcacgccaaccgatattgaatgcaaagcgacacacgctaggt
tatgagctgctgtttcgagatggagaaaaaaacgcgtttcctgagtacatggatgccgat
cgtgctacctaccgtctgattgttgaaaactttttatcccttggtaccaacccgagaatt
gcccgctcgcgctgttttatcaactttccccataaaagcttaattcgacgtttgccgctg
actctgccgcgtgagcagatcgtggtagaaattttggaaacgtgccaaccgaccgatgat
ctttttgaggcggtacaagagctgagtcagcgaggttatctgctcgcgttagatgatttt
gtgtattcacccgcttgggagcgctttttaccctacgtacagatagtcaaaatcgacatc
atggcaatggggctcgataaagcgtgtgaatttgtgcgtggtcgactggctcagggaagt
cgtcgccgatttttggcagaacgagtcgaaaccgaagatgagtttcatcaagcgcgtcat
gcgggttttaccttcttccaaggctattttttcagtaagccagaaatcattaaacagcgc
tacgtcagtccagagcatgtgattgccatgcagttgttccgcgaagtctgtcagcctgaa
gtcgattatgtgcgagtagagcgcttggtcgcgcaggacattgcgctctcctacaagctg
ctgcgtttcgtaaacactatgtcggatcggatctcggtctccatctcctcatttcgccaa
gccttggtttatcttggacaggacaaactgcgcattttcgtctctttggcggtcgcgtct
tatatctcctccaaaaagcccaaggagctttacaacttgtcgctacaaagagcgcagttt
tgccagttgatggcgacgcatccacattttaaagcgcatcgtgaacaagcgtttctgatt
ggcatgttttctgtgctggatgccttgctcgatacctcaattgagcaattggtggagcaa
ctgccgctggccgatgatgtgaagttggcactgcgagagcgtgaagggccactgggtact
ttgctcgatcttgaggagtgttttgaaaaagccgattggcaaggtgtggagcagcactgc
ctagaactgggttttgatctggaagatgtccgtcaggaattgattgaagcccagcgttgg
agccaggacatcaatcgattaatttag
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